Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavaria_20fumosa_20[genbank_20GCA_5F001179745.1_202015-07-08] 111,201 sequences; 70,469,476 total letters Query= NC_027995.1 Length=41666 Score E Sequences producing significant alignments: (Bits) Value seq53202 95.1 3e-15 seq107328 93.3 1e-14 >seq53202 Length=9363 Score = 95.1 bits (104), Expect = 3e-15 Identities = 186/275 (68%), Gaps = 0/275 (0%) Strand=Plus/Plus Query 41166 TCACTGAACAAAGTAGAAATCATTGGCAACTTAGGCAACGATCCAGAAATCCGTTACATG 41225 ||| |||| ||||| ||| | |||||| | || |||||| |||||||| |||||| Sbjct 1821 TCAGTGAATAAAGTCATCATCGTCGGCAACCTGGGGCGCGATCCGGAAATCCGCTACATG 1880 Query 41226 CCAAGCGGCGGCGCGGTTGCTAATCTAAGCATCGCCACAACTGAAAGCTGGAAGGATAAA 41285 || ||||||| ||| | || || | | | ||||| | | | ||| || || Sbjct 1881 CCCAGCGGCGACGCCATCGCCAACATTGCCGTGGCCACCTCGTTCCGTTCGAAAGACAAG 1940 Query 41286 ACCACCGGCGAGAAGAAAGAACAAACGGAATGGCACCGCGTTGTCATCTTCGGTAAGCTG 41345 | |||||||||| |||| ||| || |||||||||||| | ||||||| ||| Sbjct 1941 AACACCGGCGAGCAGAAGGAAACCACCGAATGGCACCGCATCTCGTTCTTCGGCCGTCTG 2000 Query 41346 GCAGAAATTGCTAGCGAATACCTGCGCAAAGGTAGCAAGGTGTTCATTGAAGGCAGCCTG 41405 || || || | | || | |||||| |||||| ||| | | |||||||| | ||| Sbjct 2001 GCCGAGATCGTTGGCCAGTACCTGAAAAAAGGTTCGTCGGTCTACGTTGAAGGCCGTCTG 2060 Query 41406 CGAACGCGTAAATGGCAGGACCAGGCTGGCGTTGA 41440 | ||||| || | ||| ||| |||||| || Sbjct 2061 CAGACGCGCAAGTATACCGACAAGGATGGCGTCGA 2095 >seq107328 Length=16160 Score = 93.3 bits (102), Expect = 1e-14 Identities = 196/290 (68%), Gaps = 2/290 (1%) Strand=Plus/Minus Query 41172 AACAAAGTAGAAATCATTGGCAACTTAGGCAACGATCCAGAAATCCGTTACATGCCAAGC 41231 |||||||| |||| |||||| | ||| ||| || || ||||||||| || ||| Sbjct 16069 AACAAAGTCATCCTCATCGGCAACCTCGGCCGCGACCCCGAGGTCCGTTACAACCCCAGC 16010 Query 41232 GGCGGCGCG-GTTGCTAATCTAAGCATCGCCACAACTGAAAGCTGGAAGGATAAAACCAC 41290 |||||||| | ||| | | ||| | ||||| || | ||||||| | || Sbjct 16009 GGCGGCGCCTGGTGC-ACGATCAGCCTGGCCACCACCCGCAACTGGAAGAACCGCGAGAC 15951 Query 41291 CGGCGAGAAGAAAGAACAAACGGAATGGCACCGCGTTGTCATCTTCGGTAAGCTGGCAGA 41350 |||||| | ||| | || |||||||||||||| || || || |||| || Sbjct 15950 CGGCGAACGCCAGGAAGAGACCGAATGGCACCGCGTGGTTTTCAACGACCGTTTGGCTGA 15891 Query 41351 AATTGCTAGCGAATACCTGCGCAAAGGTAGCAAGGTGTTCATTGAAGGCAGCCTGCGAAC 41410 ||||||| ||||||||||| || || || || | | | |||||| ||||| || Sbjct 15890 AATTGCTGGCGAATACCTGAAGAAGGGCCGCCCCGTCTACGTCGAAGGCCGCCTGAAGAC 15831 Query 41411 GCGTAAATGGCAGGACCAGGCTGGCGTTGATCGCTACACCACTGAAATCA 41460 || || ||||||||| ||| ||| || ||||||||| || |||| Sbjct 15830 CCGCAAGTGGCAGGACAAGGAAGGCAAGGACACCTACACCACCGAGATCA 15781 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 133033695141336