Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavaria_20fumosa_20[genbank_20GCA_5F001179745.1_202015-07-08] 111,201 sequences; 70,469,476 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq109896 84.2 3e-11 seq109776 82.4 1e-10 >seq109896 Length=22917 Score = 84.2 bits (92), Expect = 3e-11 Identities = 331/513 (65%), Gaps = 21/513 (4%) Strand=Plus/Minus Query 11443 GATCTTGCGATCAAAACGACCCGGGCGAAGGAGGGCGTCATCAAGGATATCCACGCGATT 11502 ||| | ||||||||| ||||| || || | || || ||| |||| ||| | || Sbjct 21571 GATGTGGCGATCAAACCGACCAGGCCGCATAAGAGCCGGATCGAGGACATCTGGTCTGTT 21512 Query 11503 AGTGGCCGCAATAACCACAA--TGCCAGTCTCATTGTCAAAGCCATCCATCTCGGTGAGT 11560 || | |||| || |||| ||| || | || |||| |||||||||||| | Sbjct 21511 CGTTCCGGCAAGCACGACAACGTGCTCGTG--AGTGCCAAACCCATCCATCTCGACCAAC 21454 Query 11561 AATTGATTAATTGTTTGTTCTCTCTCATCATTTGCTGGCATACCACCAGCACTGCGTTGC 11620 | ||||| | || |||| |||||| || || | | || | ||| | || Sbjct 21453 AGCTGATTGAGAGTGGACTCTCGCTCATCGTTGCCTCCGAAATTGCCGCCTTTGCCTCGC 21394 Query 11621 TTG---CCCACCGCATCAATCTCATCAATGAAGACAATACATGG----TTGATTTTCGCG 11673 || || | ||||| ||||| || ||||||| ||||| || || || ||||| Sbjct 21393 TTTTTCCCGATGGCATCGATCTCGTCGATGAAGATGATACAAGGCGCGTTCTTTCTCGCG 21334 Query 11674 GGCGATTTCAAAGAGATCGCGAACCCTTTTGGCACCCACACCAACAAACATCTCCACAAA 11733 | ||| || || || |||||||| | || || || || ||||||||||| || Sbjct 21333 GACGAG----AATAGGTCACGAACCCTCGATGAGCCTACGCCGACGAACATCTCCACGAA 21278 Query 11734 GTTTGCGGCAGAGCACTG-GATGAATGGGACATTTGATTCACCCGCGATGGCTCGGGCGA 11792 | | | || |||| || ||| |||||| | | ||| || || | ||| || | Sbjct 21277 CTCAGAACCTGA-AACTGAGAGGAAAGGGACACTAGCTTCGCCGGCAGTCGCTTTTGCAA 21219 Query 11793 GGAGGGTCTTTCCCGTACCTGGCTTACCCGCGAGAAGGGCGCCTCGGGGGATCTTGGCAC 11852 | | |||||| || ||||| || ||| | | || ||| || || || ||| | || | Sbjct 21218 GTAAGGTCTTGCCAGTACCGGGTGGACCGGATAAAATGGCACCGCGTGGTATCCTCGCGC 21159 Query 11853 C--ACTTCCAAAATATCTCTCGGGTTGCTTGAGAAAATCCACAATCTCTTCAAGTTCATC 11910 | |||| || | || ||||| |||||| || | ||||| ||| || || || Sbjct 21158 CTAGCTTC--TCGTACCGCTGGGGTTCCTTGAGGAATTTCACAAACTCCATAATCTCCTC 21101 Query 11911 TTTGGCCGCGTCAATCCCCTCAACATCACTGAA 11943 |||||| |||| ||||| | || || ||||| Sbjct 21100 CTTGGCCTCGTCCATCCCTGCGACGTCGCTGAA 21068 >seq109776 Length=48066 Score = 82.4 bits (90), Expect = 1e-10 Identities = 104/143 (73%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 122677 CCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCTGGCATGAGACCCCGCTTC 122736 || || |||||| || || ||||| || || | || ||||||||||| |||||| Sbjct 3927 CCTTCGTCTCGGCTGATGAGCTCATTGGAAAATGTCAAGCCGGGCATGAGACCGCGCTTC 3986 Query 122737 TTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCACACACGCAAAC 122796 |||| |||| |||| || ||| || |||||||||||||| ||||| || ||||| Sbjct 3987 TTCAGCCAAAAAATGGCCGCGAAAGAACCGGAGAAGAAGATCCCCTCAACCGCAGCAAAA 4046 Query 122797 GCAAAAAGGCGTTCGGCGAAGGA 122819 || | ||||| || || || || Sbjct 4047 GCGATGAGGCGCTCAGCAAACGA 4069 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 627159027669600