Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavaria_20fumosa_20[genbank_20GCA_5F001179745.1_202015-07-08] 111,201 sequences; 70,469,476 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq109776 114 2e-20 >seq109776 Length=48066 Score = 114 bits (126), Expect = 2e-20 Identities = 333/504 (66%), Gaps = 9/504 (2%) Strand=Plus/Minus Query 94440 TTGGACTGCTGAAGAGGTAGATCTCTCAAAGGATTTGGACGATTGGAAGACTC---TAAA 94496 ||||||||| || ||| | || |||||||||||||| | || ||||||| | | || Sbjct 4427 TTGGACTGCAGAGGAGATGGACCTCTCAAAGGATTTACATGACTGGAAGAACCGCCTCAA 4368 Query 94497 TGAAAATGAAAAGAAATTCATAAAATACATCCTGGCATTCTTTGCTGGATCCGATGGAAT 94556 || || || | ||||| | |||| || |||||||| | || ||||| || Sbjct 4367 CGACAACGAGCGTCATTTCATCTCTCATGTCCTCGCTTTCTTTGCAGCCTCTGATGGTAT 4308 Query 94557 TGTTTTTGAGAATATCAATAACAACTTTGCTGATGAGGTGCAATCCTCTGAAGCGAGATC 94616 || ||||| || | ||| | ||||||| ||| || | || || | | Sbjct 4307 CGTCAACGAGAACCTCGTCGAGCGCTTCTCGAATGAGGTCCAAGCCGCAGAGGCTCGCTG 4248 Query 94617 CTTCTATGCGTATCAGTGTCATAATGAA-ATGGTGCATGGGGAGACATACAGTAAACTCA 94675 |||||| | | ||| |||| ||| | | | || ||||| ||| |||| Sbjct 4247 CTTCTACGGTTTTCAAA-TCATGATGGAGAACATTCACTCCGAGACCTACTCGCTTCTCA 4189 Query 94676 TAGACAAGTATATTAAGGATGGTGCTGAGAAGAAGCAGCTCTTTGAAGCCATCCAAACAG 94735 | || | || ||||| || |||||| | | || || || || || | || Sbjct 4188 TTGATACTTACATTAAAGACCCTGCTGAACGTGAATACCTTTTCGACGCTGTCGAGACCA 4129 Query 94736 TTCCGTGTATTCAAAAG-AAAGCGGATTGGGCTATGAAGTGG-TTTGATACAAAGTCGCG 94793 |||| ||| | ||| | ||||| || |||||| | ||| ||| |||| | | Sbjct 4128 TTCCCTGTGT-CAAGCGCAAAGCAGAATGGGCTCTTCGCTGGATTTCGGACAA-GAAGAC 4071 Query 94794 TTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTC 94853 ||| ||||||||||| ||| |||| ||||| |||||||| ||||||||||| ||||| Sbjct 4070 TTCGTTTGCTGAGCGCCTCATCGCTTTTGCTGCGGTTGAGGGGATCTTCTTCTCCGGTTC 4011 Query 94854 CTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAA 94913 ||| || |||| |||||| |||||||| ||||||||||| || | || ||||| Sbjct 4010 TTTCGCGGCCATTTTTTGGCTGAAGAAGCGCGGTCTCATGCCCGGCTTGACATTTTCCAA 3951 Query 94914 CGAGCTTATCTCTCGTGACGAGGG 94937 ||||| ||| || ||||| || Sbjct 3950 TGAGCTCATCAGCCGAGACGAAGG 3927 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 582450060197240