Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavaria_20fumosa_20[genbank_20GCA_5F001179745.1_202015-07-08] 111,201 sequences; 70,469,476 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq70823 156 1e-32 seq107974 96.9 1e-14 seq51308 96.9 1e-14 seq102539 86.0 2e-11 seq41457 84.2 7e-11 >seq70823 Length=785 Score = 156 bits (172), Expect = 1e-32 Identities = 162/211 (77%), Gaps = 1/211 (0%) Strand=Plus/Minus Query 140527 GAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCTT 140586 || |||| ||||| ||||||||||| ||||| || ||||| || | || | ||||| | Sbjct 329 GACCAAG-TGAAGGGTAGACTCTTTCTGAATGTTGTAATCTGAAAGAGTGCAGCCATCCT 271 Query 140587 CAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCT 140646 ||| || || ||||||||||| |||| ||||| |||||||| || ||||| || | || Sbjct 270 GAAGCTGCTTGCCAGCAAAGATGAGACACTGCTGGTCAGGAGGGATGCCTTCCTTGTTCT 211 Query 140647 GAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCT 140706 |||| || ||||| ||||| |||| | ||||| ||| ||||| || | ||||| |||| Sbjct 210 GAATCTTGGCTTTCACATTGCCAATGGTATCAGTTGGCTCAACCTCTAATGTAATAGTCT 151 Query 140707 TTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 | || || || || || ||||| ||||| || Sbjct 150 TCCCTGTGAGGGTCTTGACAAATATCTGTAT 120 >seq107974 Length=16430 Score = 96.9 bits (106), Expect = 1e-14 Identities = 95/123 (77%), Gaps = 0/123 (0%) Strand=Plus/Minus Query 140510 ACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGA 140569 ||||||||| || | || ||||| || ||||| ||||||||||| || ||||| ||| Sbjct 9517 ACCACCACGCAAACGAAGCACAAGGTGGAGAGTGGACTCTTTTTGGATGTTATAGTCACT 9458 Query 140570 TAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGG 140629 | ||||| || ||||| || || || ||||| ||||| || ||||| ||||| || || Sbjct 9457 CAGAGTTCGACCGTCTTCGAGCTGCTTGCCAGCGAAGATGAGGCGTTGTTGATCGGGGGG 9398 Query 140630 AAT 140632 ||| Sbjct 9397 AAT 9395 >seq51308 Length=240 Score = 96.9 bits (106), Expect = 1e-14 Identities = 162/234 (69%), Gaps = 3/234 (1%) Strand=Plus/Plus Query 349564 AATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCTGTTATTACTGT 349623 ||||||| ||| |||||||| | |||||| | ||||||||| || |||||||| || Sbjct 1 AATGAAGAAAACTGCTGAAGATTTCTTAGGTCATGAAGTAACTGAAGCGGTTATTACCGT 60 Query 349624 ACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAGCATTGCGGG 349683 ||| || || ||||| ||||| || || || || ||||| || ||| || || || Sbjct 61 ACCGGCTTACTTTAACGATGCACAACGCCAGGCTACTAAAGAAGCCGGCGAGATCGCTGG 120 Query 349684 GTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATATGGGCTTGA 349743 || | ||| | | || ||||| ||||| |||||||| || | || || || | || Sbjct 121 TTTGACAGTTAAACGTATTATTAACGAACCTACTGCTGCTGCCCTGGCTTACGGTTTGGA 180 Query 349744 TAAAATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGTGGTGGTAC 349797 ||| | || | || | || ||| | ||||||| ||||||||||| Sbjct 181 CAAAGCGC---ACAAGGATATGAAAATTGCCGTATTTGATTGCGGTGGTGGTAC 231 >seq102539 Length=187 Score = 86.0 bits (94), Expect = 2e-11 Identities = 95/127 (75%), Gaps = 0/127 (0%) Strand=Plus/Plus Query 140503 TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562 ||| ||| || ||||| | | ||||| | || || ||||||||||| || ||||| | Sbjct 60 TTTGCATTCCTCCACGAAGACGAAGAACCAAGTGGAGGGTAGACTCTTTCTGGATATTGT 119 Query 140563 AATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGAT 140622 |||| || | ||||| || || || || ||||| ||||| || || ||||||||||| | Sbjct 120 AATCCGAAAGAGTTCGGCCGTCCTCGAGCTGTTTGCCAGCGAAAATGAGACGTTGCTGGT 179 Query 140623 CAGGAGG 140629 | || || Sbjct 180 CGGGCGG 186 >seq41457 Length=232 Score = 84.2 bits (92), Expect = 7e-11 Identities = 96/129 (74%), Gaps = 0/129 (0%) Strand=Plus/Plus Query 204925 TTAATAGTACCAAGGTTTTGTTGATTTGTTTTATAATTAACAGCATCTTTATATAACATA 204984 || |||||||| |||||||| || |||| ||| ||| | ||||||||||| |||| Sbjct 29 TTGATAGTACCCAGGTTTTGCTGGTTTGATTTCGCGTTAGCCGCATCTTTATACAACAGG 88 Query 204985 TATGGTGTACCTGTTTCCATTTGCGAATCTAAAATTTTGATCCATAAATCACGAGCATTA 205044 ||||||||||| ||||| ||||| |||||| | || ||| | ||| | || ||| Sbjct 89 TATGGTGTACCGGTTTCTATTTGACTATCTAATACCGCGAACCAAAGATCCTGTGCCTTA 148 Query 205045 ATTTGTTTA 205053 ||| |||| Sbjct 149 ATTACTTTA 157 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1513095521879403