Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavaria_20fumosa_20[genbank_20GCA_5F001179745.1_202015-07-08] 111,201 sequences; 70,469,476 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq109776 109 6e-19 seq49190 98.7 1e-15 seq40074 98.7 1e-15 seq103458 96.9 4e-15 seq58313 84.2 2e-11 >seq109776 Length=48066 Score = 109 bits (120), Expect = 6e-19 Identities = 335/512 (65%), Gaps = 16/512 (3%) Strand=Plus/Minus Query 59613 TCATTCTGGTCCGTCGAGGAGATTGACCTCGCCGGAGACCTGAAGGATTGGGACAAGC-- 59670 ||||| ||| | | |||||||| |||||| | || | | || ||| | || | Sbjct 4432 TCATTTTGGACTGCAGAGGAGATGGACCTCTCAAAGGATTTACATGACTGGAAGAACCGC 4373 Query 59671 -TCAATTACGACGAGCAGCATTTCATCAAGATGGTCCTGGCCTTCTTCGCGGCGAGTGAT 59729 |||| || |||||| ||||||||| ||||| || ||||| || || |||| Sbjct 4372 CTCAACGACAACGAGCGTCATTTCATCTCTCATGTCCTCGCTTTCTTTGCAGCCTCTGAT 4313 Query 59730 GGAATTGTGATGGAAAATATAGACATGAACTTTTCCAAGGATGTCCAGATTGCCGAGGCC 59789 || || || | || || | | | | ||| || || || ||||| || ||||| Sbjct 4312 GGTATCGTCAACGAGAACCTCGTCGAGCGCTTCTCGAATGAGGTCCAAGCCGCAGAGGCT 4253 Query 59790 CGGTCGTTCTACGCGTATCAGTCGTTCAACGAGTCTATCCACTCCGAGACGTACTCGCTC 59849 || | ||||||| | ||| | | ||| || ||||||||||| |||||||| Sbjct 4252 CGCTGCTTCTACGGTTTTCAAATCATGATGGAGAACATTCACTCCGAGACCTACTCGCTT 4193 Query 59850 ATGATCGATAAGTTGGTCAAGGATCCGGAAGA----GAAGGCTGGTCTGTTCCGTGCCAT 59905 | || |||| | | || || || | || ||| | || ||| || | Sbjct 4192 CTCATTGATACTTACATTAAAGACCCTGCTGAACGTGAATAC----CTTTTCGACGCTGT 4137 Query 59906 AGAGACGTCCCCCGCAGTTAAACAAAAAGCAGAATGGGCCATGCAGTGGATGA--GTCCT 59963 ||||| ||| || || | |||||||||||||| | | ||||| | | Sbjct 4136 CGAGACCATTCCCTGTGTCAAGCGCAAAGCAGAATGGGCTCTTCGCTGGATTTCGGACAA 4077 Query 59964 GGAG-CATCATTTGCACAACGTCTCATAGCTTTTGCATGCG-TGGAAGGAATCTTCTTCT 60021 | || | || ||||| | || ||||| |||||||| |||| | || || |||||||||| Sbjct 4076 GAAGACTTCGTTTGCTGAGCGCCTCATCGCTTTTGC-TGCGGTTGAGGGGATCTTCTTCT 4018 Query 60022 CTGGCTCGTTCTGTGCTATTTTCTGGCTCAAAAAGCGTGGCCTCATGCCGGGCCTGAGTT 60081 | || || ||| || ||||| ||||| || ||||| || |||||||| ||| ||| | Sbjct 4017 CCGGTTCTTTCGCGGCCATTTTTTGGCTGAAGAAGCGCGGTCTCATGCCCGGCTTGACAT 3958 Query 60082 TCTCCAACGAGCTGATTTCCCGGGACGAGGGC 60113 | ||||| ||||| || ||| ||||| ||| Sbjct 3957 TTTCCAATGAGCTCATCAGCCGAGACGAAGGC 3926 >seq49190 Length=333 Score = 98.7 bits (108), Expect = 1e-15 Identities = 180/264 (68%), Gaps = 0/264 (0%) Strand=Plus/Minus Query 79317 ATCGGGCAGGCCCGGGCACTCGTGCGGGCACATCAGGTGCCAGTCCTCGTCCTTCTCAAC 79376 ||||| |||||| || ||||||||||| | ||| ||||||||| | |||||| Sbjct 321 ATCGGCCAGGCCTGGTGCTTCGTGCGGGCAGAAAAGGCTCCAGTCCTCATTAGCCTCAAC 262 Query 79377 CTTCTCCATGAAGAGGTCCGGGATCCACAGGGCCGTGAAGAGGTCGCGGCAACGCATCTC 79436 | ||| || | ||| | | ||| | ||| || | |||||| |||||| || Sbjct 261 GCGTTGCATAAATAAGTCGGACACCCATAAGGCGTAAAACAAATCGCGGGCACGCATTTC 202 Query 79437 CTCGTCGCCCTGGTTCAGACGCAGCTCGAGAAAGTCCATGATGTCGGCGTGCCACGGCTC 79496 || | || ||||| |||||| || || || || | ||| ||||| ||||| ||||| Sbjct 201 TTCCTTACCGTGGTTTTTACGCAGGTCAAGGAATTCGAAGATATCGGCATGCCAAGGCTC 142 Query 79497 CAGATAGATGGCGAACGAACCCTTGCGCTTGCCGCCGCCCTGGTTGACGTACCGGGCCGT 79556 | || || || || | ||| || ||||| || || ||||| | || || ||||| || Sbjct 141 TAAGTAAATAGCAAAGGCACCTTTACGCTTACCACCACCCTGATCTACATAGCGGGCGGT 82 Query 79557 GTTGTTGAAAACTCGGAGCATGGG 79580 | || || || || ||||| || Sbjct 81 ATCATTAAACACGCGCAGCATAGG 58 Score = 86.0 bits (94), Expect = 7e-12 Identities = 182/272 (67%), Gaps = 0/272 (0%) Strand=Plus/Plus Query 19415 GGTATCGTCCCAATGCTCCGCGTCTTCAACAACACGGCCAGGTACGTCAACCAGGGGGGC 19474 ||||| |||| ||||| ||||| || || | || ||| | || || | ||||| || Sbjct 49 GGTATTATCCCTATGCTGCGCGTGTTTAATGATACCGCCCGCTATGTAGATCAGGGTGGT 108 Query 19475 GGCAAACGCAAGGGCTCGTTCGCCATCTACCTCGAGCCATGGCACGCGGACGTCATGGAT 19534 || || || || || | || || || ||| | ||||| ||||| || || || | || Sbjct 109 GGTAAGCGTAAAGGTGCCTTTGCTATTTACTTAGAGCCTTGGCATGCCGATATCTTCGAA 168 Query 19535 TTCCTCGAACTGCGCCTGAACCAGGGTGACGAGGAGATGCGCTGTCGCGACCTCTTCACG 19594 ||||| || ||||| ||||| ||| | || || ||||| ||||| | || Sbjct 169 TTCCTTGACCTGCGTAAAAACCACGGTAAGGAAGAAATGCGTGCCCGCGATTTGTTTTAC 228 Query 19595 GCCTTGTGGATTCCGGACCTATTCATGGAGAAGGTTGAGAAGGACGAAGAATGGCACCTG 19654 ||||| ||| | | ||| |||| ||| | |||||| | || || ||| ||| Sbjct 229 GCCTTATGGGTGTCCGACTTATTTATGCAACGCGTTGAGGCTAATGAGGACTGGAGCCTT 288 Query 19655 ATGTGCCCGCACGAATGCCCTGGCCTACCCGA 19686 | |||||||||||| || ||||| |||| Sbjct 289 TTCTGCCCGCACGAAGCACCAGGCCTGGCCGA 320 >seq40074 Length=343 Score = 98.7 bits (108), Expect = 1e-15 Identities = 191/281 (68%), Gaps = 6/281 (2%) Strand=Plus/Minus Query 79516 CCCTTGCGCTTGCCGCCGCCCTGGTTGACGTACCGGGCCGTGTTGTTGAAAACTCGGAGC 79575 ||||||||||||||||| |||||||||| | |||||||| ||| | || || Sbjct 339 CCCTTGCGCTTGCCGCC---CTGGTTGACGGCCACGGCCGTGTCGTTCACCACCTTCAGG 283 Query 79576 ATGGGCACGATGCCGTCGGCGACGCCGTTCGTCCCGTTGATTCGTGTACCGCTCGCCCGA 79635 | |||||||| ||| | | |||||| || || ||||| | | ||| ||| || Sbjct 282 AAGGGCACGACGCCCTGGCTCTTGCCGTTGGTGCCCTTGATATGGGAACCCAGCGCACGC 223 Query 79636 ATGTTCGAGCAGTGGATTCCGATGCCCCCGGACCACTTGGAGATGTGCGCGCACTCCTTG 79695 | || |||| | | || | ||| || | ||||| | ||||| |||||| Sbjct 222 ACCGGCGTCCAGTCGTTGCCCAGGCCGCCAGCGAACTTGCTCAGCAGCGCGTTCTCCTTC 163 Query 79696 AGCGTCTCGTAGATGCCCTCGATCGAGTCGTCCTTCATAGCGACCAGGAAGCAGCTCGAC 79755 |||| |||||||||||| |||| |||||| || | | |||| ||||||| || Sbjct 162 AGCGCCTCGTAGATGCCGTCGA---GGTCGTCGGACACGGTGGTCAGGTAGCAGCTGGAG 106 Query 79756 ATCTGTGGGTTGTTCGTACCGGCGTTGAAGAGGGTCGGCGT 79796 | ||| | | | ||| ||||||||||| || || ||||| Sbjct 105 AGCTGCGAGCGGCGCGTGCCGGCGTTGAACAGCGTGGGCGT 65 >seq103458 Length=5285 Score = 96.9 bits (106), Expect = 4e-15 Identities = 211/312 (68%), Gaps = 8/312 (3%) Strand=Plus/Minus Query 78849 CGAAAGGC---CGA-GCATCATGAAGACATCGGCCAGGCCCTGGACGCCGATAGCGATCG 78904 |||||||| ||| | |||||||| | || || || || || ||||||||| |||| | Sbjct 2242 CGAAAGGCATGCGAAGAATCATGAATGCGTCAGCGAGACCTTGTACGCCGATACCGATGG 2183 Query 78905 GTCGGTGGCGCATGTTGCTCTTTCGGGCCGCCTCGGTCGGGTAAAAGTTCCGATCGATGA 78964 | || || || | |||| | || | | |||||| ||| |||| || |||| Sbjct 2182 GACGATGACGGAAGTTGGACCGCCGCGTTTCGGGGGTCGGATAATAGTTGACGTCAATGA 2123 Query 78965 CGCGGTTCAGGTTACGCGTGACGACCCGAGTCACCTCGTACAATTTGGCGAAATCAAAAT 79024 | | ||| || || ||||| ||| || || || | |||||| |||||| | Sbjct 2122 CTCTGTTGAGATTGTAGGTGACCACCTTCGTAACGTCATGCAATTTTTGGAAATCGTA-- 2065 Query 79025 GATTTCCTTTGA--TGAAAGTCGGTAGGCACAGCGATGCCAGGTTGCACACGGCCGTCTC 79082 || || || || | || ||||| || ||| || |||| ||||| || || ||||| Sbjct 2064 GACATCATTGGAGATAAATGTCGGAAGAGCCAGAGAAGCCAAATTGCAAACAGCAGTCTC 2005 Query 79083 GTCCGGGCTAGAAACCTCGATGATTTCTGTGCACAAATTAGACGACTTGATGGTGCCGAT 79142 |||||| || |||||| ||||| ||||| | || |||||||||||| |||| Sbjct 2004 ATCCGGGGAGGAGTACTCGATAATTTCGGTGCAAAGGTTGGACGACTTGATGACACCGAG 1945 Query 79143 GTTCTTCTGGTT 79154 || | |||||| Sbjct 1944 ATTTTGCTGGTT 1933 Score = 95.1 bits (104), Expect = 1e-14 Identities = 154/220 (70%), Gaps = 4/220 (2%) Strand=Plus/Plus Query 19103 CCTCAGTACCTTTTCATGCGAGTCGCGGTCGGCATCCATGGCGACGACCTCCCGCGAGTC 19162 ||||| || | ||||||| |||||||| ||||| || || ||| | ||||| Sbjct 1032 CCTCAACACATGATCATGCGTGTCGCGGTTGGCATTCACGGTTCAGACATTGAACGAGTT 1091 Query 19163 CGCGAGACATACGACCTGATGAGCCAGAAG--TTCTTCACGCACGCGACGCCGACCCTTT 19220 || || ||| | || ||| | ||| | |||||| ||||| | |||||||| | Sbjct 1092 TTGGAAACCTACAATCTCATGT--CTGAACGCTACTTCACTCACGCATCTCCGACCCTGT 1149 Query 19221 TCAACGCCGGTACGAACAACCCGCAGATGTCGAGCTGTTTCCTAGTGGCTATGAAGGATG 19280 ||||||| || ||| | ||||| ||| || |||||| | | |||||| || | Sbjct 1150 TCAACGCTGGCACGCCACATCCGCAAATGAGCAGTTGTTTCTTGATCTGTATGAAAGAAG 1209 Query 19281 ACAGCATTGAGGGCATCTACGAGACGCTCAAGGAGTGCGC 19320 | ||||||||||| |||||||| || |||||| | ||||| Sbjct 1210 ATAGCATTGAGGGTATCTACGACACACTCAAGAATTGCGC 1249 Score = 95.1 bits (104), Expect = 1e-14 Identities = 281/431 (65%), Gaps = 12/431 (3%) Strand=Plus/Plus Query 19841 GCCAAGTCAAATCAGAAGAACATCGGCGCGATCAAGTCGTCCAACCTGTGTACTGAAATC 19900 || ||||| || ||| | || |||| | ||||||||||||||||| || || ||||| Sbjct 1924 GCGAAGTCGAACCAGCAAAATCTCGGTGTCATCAAGTCGTCCAACCTTTGCACCGAAATT 1983 Query 19901 ATGGAGGTTTCCAAGCCGGACGAGACTGCCGTGTGTAATCTGGCGTCCCTGTGCCTGCCG 19960 || ||| ||| ||||| |||||||| || || ||| |||| || ||| || ||| Sbjct 1984 ATCGAGTACTCCTCCCCGGATGAGACTGCTGTTTGCAATTTGGCTTCTCTGGCTCTTCCG 2043 Query 19961 AC---TTTCGTCAAGGCCTCCTCCTTCGACTTTGCCAAATTGTACGAGGTGACCCGGGTC 20017 || | || ||| | || ||| || |||||| | || || || ||| Sbjct 2044 ACATTTATCTCCAATG---ATGTCTACGATTTCCAAAAATTGCATGACGTTACGAAGGTG 2100 Query 20018 GTCACGCGTAATCTGAATCGCGTCATCGATCGGAACTTTTACCCGACCGAGGCGGCGCGC 20077 ||||| ||||| || | ||||| || |||| ||| |||||| | |||| Sbjct 2101 GTCACCTACAATCTCAACAGAGTCATTGACGTCAACTATTATCCGACCCCCGAAACGCGG 2160 Query 20078 AAGTCGAATATGCGCCACCGGCCGATCGCGATCGGCGTCCAGGGCCTGGCCGACGTTTTC 20137 ||| || | || || || || |||| |||||||| || || || || |||| ||| Sbjct 2161 CGGTCCAACTTCCGTCATCGTCCCATCGGTATCGGCGTACAAGGTCTCGCTGACGCATTC 2220 Query 20138 ATGATGCTCGGCCTCTCATTCGACGATCCCAAGGCGCGCGAGCTCAACAAGGGCATCTTC 20197 ||||| || || | | ||||| ||| | || | |||||||| || ||| Sbjct 2221 ATGATTCTTCGCATGCCTTTCGATTCACCCGAAGCTAAAGTGCTCAACATCCAGATATTC 2280 Query 20198 GAGGCCGTGTACCACGCGGCCCTCCTGGAATCGT---GCGAACTCGCCAAAGAGGACGGC 20254 ||| || | || || | || ||||| ||| ||||| | || | || | || Sbjct 2281 GAGACCATTTATCATGGTGC---TTTGGAAGCGTCTAGCGAATTGGCTGAGAAGCATGGA 2337 Query 20255 CCGTACGAGAC 20265 ||||||||||| Sbjct 2338 CCGTACGAGAC 2348 >seq58313 Length=1260 Score = 84.2 bits (92), Expect = 2e-11 Identities = 195/289 (67%), Gaps = 5/289 (2%) Strand=Plus/Plus Query 59825 TATCCACTCCGAGACGTACTCGCTCATGATCGATAAGTTGGTCAAGGATCCGGAAGAGAA 59884 ||||||||| || || ||| | | ||||||| | | || || || |||| || || Sbjct 22 TATCCACTCGGAAACCTACGCTTTGTTGATCGACACTTACGTAAAAGACCCGGCCGAAAA 81 Query 59885 GGCTGGTCTGTTCCGTGCCATAGAGACGTCCCCCGCAGTTAAACAAAAAGCAGAATGGGC 59944 || | | |||||| || || || || || || | | ||||| |||||||| Sbjct 82 GGATCGGTTGTTCCACGCTATCGACACCATACCATGTGTGCAGAAGAAAGCCGAATGGGC 141 Query 59945 CATGCAGTGGATGAGTCCTGGAGCATCATTTGCACAACGTCTCATAGCTTTTGCATGCG- 60003 ||| ||||| | || || | ||||| | ||| | | || ||||| |||| Sbjct 142 GCTGCGCTGGATCAACAACGG--CAAC-TTTGCCGAGCGTTTGGTGGCATTTGC-TGCGG 197 Query 60004 TGGAAGGAATCTTCTTCTCTGGCTCGTTCTGTGCTATTTTCTGGCTCAAAAAGCGTGGCC 60063 | ||||| |||||||| || || ||||| |||| |||||||| ||||| || || Sbjct 198 TTGAAGGCATCTTCTTTTCGGGTAGTTTCTGCTCTATCTTCTGGCTGAAAAAACGCGGAT 257 Query 60064 TCATGCCGGGCCTGAGTTTCTCCAACGAGCTGATTTCCCGGGACGAGGG 60112 | ||||| || |||| |||| ||||||||||| || || || || || Sbjct 258 TGATGCCAGGGCTGACTTTCAGTAACGAGCTGATATCGCGCGATGAAGG 306 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547762343671440