Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavaria_20fumosa_20[genbank_20GCA_5F001179745.1_202015-07-08] 111,201 sequences; 70,469,476 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq36605 131 2e-25 seq107451 116 4e-21 seq49190 102 9e-17 seq108785 95.1 1e-14 seq77334 91.5 2e-13 >seq36605 Length=1039 Score = 131 bits (144), Expect = 2e-25 Identities = 213/303 (70%), Gaps = 9/303 (3%) Strand=Plus/Minus Query 124598 CCAGTCGCGCTTGGCATCCAGGTTTCCGAGCTCGATTGGCTTGGCCGTCTTGTTC--CAC 124655 ||||||||||||||| || ||||| || ||||||| || |||| |||||| ||| Sbjct 1039 CCAGTCGCGCTTGGCGTCGAGGTTGCCCAGCTCGAGCACCTCGGCC---TTGTTCAGCAC 983 Query 124656 --TCCGCCAAACCCAGT--GTAATCTTGCGCGTCACAAACTCGGAACCGCGTCGCTCAGA 124711 || || || || |||||||| || || || || ||||| || || Sbjct 982 GATCTTGGCGACGGTGTCGGTGATCTTGCGGGTGACGAATTCACGGCCGCGCAGCGGCGA 923 Query 124712 CTCGTGGTTGAACAGAATGCCAGTACACGCAAACATCCCGTACGACTCGCGGTAGTTTTT 124771 ||||||||||||||||||||| | | | || || | ||||| ||||||||||| Sbjct 922 CTCGTGGTTGAACAGAATGCCCGAGGAACCGAAGATGTCATACGATTCGCGGTAGTTCAC 863 Query 124772 CGTCATCCAATACCCAAAGAGCTTGGACACGCCATAGGGGCTTCGGGGGTAGAATGGGGT 124831 ||||||||| | | | | ||||||| |||||| || ||||| || |||||||| ||||| Sbjct 862 CGTCATCCAGTGCGCGTACAGCTTGGCCACGCCGTACGGGCTGCGCGGGTAGAACGGGGT 803 Query 124832 GTTTTCATTTTGGGTAGGTTGCTGAATCTTCCCAAACATCTCCGAAGTACCCGCCTGATA 124891 || ||| ||| | | ||| | ||| || ||||| ||||| || ||||| || Sbjct 802 GTCTTCGACTTGCGGAATGGCCTGCACCTTGCCGAACATTTCCGAGGTCGAGGCCTGGTA 743 Query 124892 GAA 124894 ||| Sbjct 742 GAA 740 Score = 96.9 bits (106), Expect = 4e-15 Identities = 195/284 (69%), Gaps = 13/284 (5%) Strand=Plus/Minus Query 159048 CCAGTCGCGCTTGGCATCCATGTTCCCGAGCTCGATGACTTTTCCAGACTTTTTC--CAC 159105 ||||||||||||||| || | ||| || ||||||| || | | | ||| ||| ||| Sbjct 1039 CCAGTCGCGCTTGGCGTCGAGGTTGCCCAGCTCGAGCACCT---CGGCCTTGTTCAGCAC 983 Query 159106 --TCAGCCAGACCGAGC--GTGATCTTGCGCGTCACAAACTCTGCTCCGCGCCGTTCCGA 159161 || ||| | | ||||||||||| || || || || |||||| | ||| Sbjct 982 GATCTTGGCGACGGTGTCGGTGATCTTGCGGGTGACGAATTCACGGCCGCGCAGCGGCGA 923 Query 159162 CTCATGGTTAAACAGAATGCCGGTACAAGCGAACAGGTTATAGGACTCGCGGTAATTTTT 159221 ||| ||||| ||||||||||| | || |||| | || ||| || |||||||| || Sbjct 922 CTCGTGGTTGAACAGAATGCCCGAGGAACCGAAGATGTCATACGATTCGCGGTAGTTCAC 863 Query 159222 AGTTATCCAGTATCCAAAGAGCTTGGAGACGCCGTATGGACTCCGAGGATAAAA--TGGT 159279 || ||||||| | | ||||||| |||||||| || || || || || || ||| Sbjct 862 CGTCATCCAGTGCGCGTACAGCTTGGCCACGCCGTACGGGCTGCGCGGGTAGAACGGGGT 803 Query 159280 GTCCCCTCATTTTGAATTGGTTCCTGAACCTTTCCAAACATTTC 159323 ||| | || | | ||| |||| ||||| || |||||||| Sbjct 802 GTCTTCGACTTGCGGAATGG--CCTGCACCTTGCCGAACATTTC 761 >seq107451 Length=3332 Score = 116 bits (128), Expect = 4e-21 Identities = 204/293 (70%), Gaps = 7/293 (2%) Strand=Plus/Plus Query 159000 CTGTTGGAGCATGAGCCACATGGC--CTCGACGTAATCCTGCGCGTGACCCCAGTCGCGC 159057 ||| || ||||| ||||| | || ||||| ||| || ||||||| |||||||||||| Sbjct 2243 CTGCTGCAGCATCAGCCA--TTGCATCTCGATGTAGTCGCGCGCGTGGCCCCAGTCGCGC 2300 Query 159058 TTGGCATCCATGTTCCCGAGC--TCGATGACTTTTCCAGACTTTTTCCAC-TCAGCCAGA 159114 ||||| | ||| ||||| | | |||| | | | | | | | ||||| Sbjct 2301 AGCGCATCGAGGTTGCCGAGGAATAGTTGACGCTCGATGCCCTGGGCGATGTTGGCCAGC 2360 Query 159115 CCGAGCGTGATCTTGCGCGTCACAAACTCTGCTCCGCGCCGTTCCGACTCATGGTTAAAC 159174 || |||||||||||||||| || || | | || || || |||||| ||||| ||| Sbjct 2361 GCGCGCGTGATCTTGCGCGTGACGAAGGTTTCGCCACGGCGCGGCGACTCGTGGTTGAAC 2420 Query 159175 AGAATGCCGGTACAAGCGAACAGGTTATAGGACTCGCGGTAATTTTTAGTTATCCAGTAT 159234 || |||||| | || ||| ||| | ||| | ||||||||||| || |||||||| Sbjct 2421 AGGATGCCGTTGCAGGCGTACATGCCATACGCTTCGCGGTAATTGACGGTGATCCAGTAG 2480 Query 159235 CCAAAGAGCTTGGAGACGCCGTATGGACTCCGAGGATAAAATGGTGTCCCCTC 159287 || | || |||| ||| |||| ||||| || ||||| || || || | ||| Sbjct 2481 GCATACAGTTTGGCGACCGCGTAGGGACTGCGCGGATAGAACGGCGTGCTCTC 2533 >seq49190 Length=333 Score = 102 bits (112), Expect = 9e-17 Identities = 176/256 (69%), Gaps = 0/256 (0%) Strand=Plus/Plus Query 53490 ATGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACGTCAACCAGGGTG 53549 |||| || | |||||||| ||||| || || | || ||||| || || | ||||||| Sbjct 47 ATGGTATTATCCCTATGCTGCGCGTGTTTAATGATACCGCCCGCTATGTAGATCAGGGTG 106 Query 53550 GTGGGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCGACATTATGG 53609 |||| ||||| || || | || || || ||| | ||||| ||||| ||||| || | | Sbjct 107 GTGGTAAGCGTAAAGGTGCCTTTGCTATTTACTTAGAGCCTTGGCATGCCGATATCTTCG 166 Query 53610 AGTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCTGCCGTGACCTGTTTA 53669 | || || || |||||| || || ||| | ||||| ||||| ||| || ||||| Sbjct 167 AATTCCTTGACCTGCGTAAAAACCACGGTAAGGAAGAAATGCGTGCCCGCGATTTGTTTT 226 Query 53670 CAGCTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGGAGAAGGACGAGGAGTGGTACC 53729 || | ||| | | ||| | || |||||| || ||| | ||||| ||| || Sbjct 227 ACGCCTTATGGGTGTCCGACTTATTTATGCAACGCGTTGAGGCTAATGAGGACTGGAGCC 286 Query 53730 TGATGTGCCCGAACGA 53745 | | |||||| |||| Sbjct 287 TTTTCTGCCCGCACGA 302 >seq108785 Length=46973 Score = 95.1 bits (104), Expect = 1e-14 Identities = 241/363 (66%), Gaps = 9/363 (2%) Strand=Plus/Minus Query 124487 CTCGATAAACTCACGGATGCTGTGCGTCTCACCCGTGCCAATCACGAAATCTTCGGGAAT 124546 ||||| |||| || | ||||| | | | || ||| | || ||||| || ||||| | Sbjct 12046 CTCGACGAACTGGCGCACGCTGTACTGCACGCCGGTGGCGATGACGAAGTCGTCGGGGGT 11987 Query 124547 CGACTGCTGCAACATAAGCCACATGGCTTGGACGTAGTCCTCTGCGTGCCCCCAGTCGCG 124606 |||||||| ||| |||||| || ||||||||| || || ||||||||||| Sbjct 11986 GTCCTGCTGCAGCATGAGCCACTGCATTTCGACGTAGTCGCGCGCATGGCCCCAGTCGCG 11927 Query 124607 CTTGGCATCCAGGTTTCCGAGCTCGATT--GGCTTGGCCGTCTTGTTCCACTCCGCCAAA 124664 | ||| || ||| || || | | | | || | | | | | | | | | Sbjct 11926 CAGGGCGCTCATGTTGCCAAGGTGCACACAGTCCTGCAGGCCCAGCGCGATGCGGGCGAT 11867 Query 124665 CCCA-GTGTAATCTTGCGCGTCACAAA---CTCGGAACCGCGTCGCTCAGACTCGTGGTT 124720 || | || |||||||| || || || |||| ||||| || ||| ||||| Sbjct 11866 GGCACGGGTGATCTTGCGGGTGACGAAGGTCTCG---CCGCGCAGCGGGCTCTCATGGTT 11810 Query 124721 GAACAGAATGCCAGTACACGCAAACATCCCGTACGACTCGCGGTAGTTTTTCGTCATCCA 124780 ||| || | ||| | || ||| |||| ||||| | |||||||||||| ||| ||||| Sbjct 11809 GAAGAGCACGCCGTTGCAGGCATACATGCCGTAGGCCTCGCGGTAGTTGACCGTGATCCA 11750 Query 124781 ATACCCAAAGAGCTTGGACACGCCATAGGGGCTTCGGGGGTAGAATGGGGTGTTTTCATT 124840 || || ||||||||| || | |||||||| || |||||||| || ||| | || || Sbjct 11749 GTAGGCATAGAGCTTGGCGACCGCGTAGGGGCTGCGCGGGTAGAAGGGCGTGGTCTCCTT 11690 Query 124841 TTG 124843 || Sbjct 11689 CTG 11687 >seq77334 Length=160 Score = 91.5 bits (100), Expect = 2e-13 Identities = 110/150 (73%), Gaps = 0/150 (0%) Strand=Plus/Minus Query 53501 CCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACGTCAACCAGGGTGGTGGGAAGCGC 53560 || ||||| ||||| || || | || ||||| || || | ||||||||||| ||||| Sbjct 150 CCAATGCTGCGCGTGTTTAATGATACCGCCCGTTATGTAGATCAGGGTGGTGGCAAGCGT 91 Query 53561 AAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCGACATTATGGAGTTTCTCGAG 53620 || || | || || || ||||| ||||| ||||| ||||| ||| | || ||| | || Sbjct 90 AAAGGCGCCTTTGCTATTTACCTGGAGCCATGGCATGCCGATATTTTTGAATTTTTAGAC 31 Query 53621 CTGCGTCTGAATCAGGGTGACGAAGAGATG 53650 |||||| || || ||| | ||||| ||| Sbjct 30 CTGCGTAAAAACCACGGTAAAGAAGAAATG 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 546455362919800