Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavaria_20fumosa_20[genbank_20GCA_5F001179745.1_202015-07-08] 111,201 sequences; 70,469,476 total letters Query= NC_028491.1 Length=98392 Score E Sequences producing significant alignments: (Bits) Value seq110395 100 2e-16 >seq110395 Length=10286 Score = 100 bits (110), Expect = 2e-16 Identities = 164/231 (71%), Gaps = 4/231 (2%) Strand=Plus/Minus Query 34479 GCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGA 34538 |||||| | |||||| | ||||||||||| ||| |||||| || ||||| || || || Sbjct 9983 GCCGCCGCGAAGACGGAGGACCAAATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGA 9924 Query 34539 AAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGG 34598 || || ||| |||| || || || || ||||| || || | ||||||||| || || || Sbjct 9923 GAGGGTACGCCCGTCCTCGAGCTGCTTGCCGGCGAAGATAAGACGCTGTTGATCGGGGGG 9864 Query 34599 CACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTC-TTCGCTCTCC 34656 | || ||||| || ||| ||| | |||||| | || || || || | || Sbjct 9863 GATGCCTTCCTTATCCTGGAT-TTTGGCCTTAACGTTGTCGATGGTATCGGACGAT-TCG 9806 Query 34657 ACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATG 34707 || || | ||| ||||| || || || | ||| || || || ||||||||| Sbjct 9805 ACCTCGAGGGTGATCGTCTTCCCAGTAAGCGTCTTAACGAAGATCTGCATG 9755 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 314303058873833