Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavaria_20fumosa_20[genbank_20GCA_5F001179745.1_202015-07-08] 111,201 sequences; 70,469,476 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq110395 134 1e-26 seq70823 89.7 4e-13 >seq110395 Length=10286 Score = 134 bits (148), Expect = 1e-26 Identities = 170/234 (73%), Gaps = 0/234 (0%) Strand=Plus/Plus Query 26984 CGCCATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACC 27043 || ||||||||| || || || || || || || ||| | || || || || || ||| | Sbjct 9752 CGGCATGCAGATCTTCGTTAAGACGCTTACTGGGAAGACGATCACCCTCGAGGTCGAATC 9811 Query 27044 GTCCGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGA 27103 |||||| | || || | || || ||||| || || || |||||||| || ||||| Sbjct 9812 GTCCGATACCATCGACAACGTTAAGGCCAAAATCCAGGATAAGGAAGGCATCCCCCCCGA 9871 Query 27104 TCAACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTA 27163 |||||||||| | || | ||||||||| || | || ||| | ||| | ||||| || Sbjct 9872 TCAACAGCGTCTTATCTTCGCCGGCAAGCAGCTCGAGGACGGGCGTACCCTCTCCGACTA 9931 Query 27164 CAACATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 |||||| || |||||||| ||| | |||||||| | ||| | || || ||||| Sbjct 9932 CAACATCCAGAAGGAGTCCACCCTCCATTTGGTCCTCCGTCTTCGCGGCGGCAT 9985 Score = 113 bits (124), Expect = 4e-20 Identities = 154/214 (72%), Gaps = 1/214 (0%) Strand=Plus/Plus Query 26984 CGCCATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACC 27043 || |||||| ||||| || || || || || || ||| | || || || || || || | Sbjct 9980 CGGCATGCAAATATTCGTCAAGACGCTCACTGGGAAGACCATCACCCTCGAGGTCGAGTC 10039 Query 27044 GTCCGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGA 27103 ||||||| | || || | ||||| || || || ||||| |||||||| || ||||| Sbjct 10040 GTCCGACACCATCGATAACGTCAAGGCTAAGATCCAGGACAAGGAAGGCATCCCGCCCGA 10099 Query 27104 TCAACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTA 27163 || ||||| | || | || ||||| || ||||||||| | || | |||||||| Sbjct 10100 CCAGCAGCGCCTGATTTTTGCAGGCAAGCAGTTGGAAGACGGCCGCACGCTCTCCGATTA 10159 Query 27164 CAACATTCAAAAGGAGTCGACCTTACAT-TTGGT 27196 ||| || || ||||| |||||| | ||| ||||| Sbjct 10160 CAATATCCAGAAGGAATCGACCCTCCATCTTGGT 10193 >seq70823 Length=785 Score = 89.7 bits (98), Expect = 4e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 || ||||||||||| || || || || || ||| ||||||| | || || || || | Sbjct 120 ATACAGATATTTGTCAAGACCCTCACAGGGAAGACTATTACATTAGAGGTTGAGCCAACT 179 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || | |||| | || ||| || ||||| |||| |||||||| || || || || Sbjct 180 GATACCATTGGCAATGTGAAAGCCAAGATTCAGAACAAGGAAGGCATCCCTCCTGACCAG 239 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||| || | || | || ||||| || | | || | | || |||| ||||||||| Sbjct 240 CAGTGTCTCATCTTTGCTGGCAAGCAGCTTCAGGATGGCTGCACTCTTTCAGATTACAAC 299 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGT 27196 ||||| || ||||| ||| | || ||||| Sbjct 300 ATTCAGAAAGAGTCTACCCTTCACTTGGT 328 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434313857987520