Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavaria_20fumosa_20[genbank_20GCA_5F001179745.1_202015-07-08] 111,201 sequences; 70,469,476 total letters Query= NC_028657.1 Length=60919 Score E Sequences producing significant alignments: (Bits) Value seq107328 152 2e-32 seq53202 140 1e-28 seq81523 98.7 4e-16 >seq107328 Length=16160 Score = 152 bits (168), Expect = 2e-32 Identities = 216/302 (72%), Gaps = 4/302 (1%) Strand=Plus/Minus Query 7282 GTTAACAAAGTCATTCTGGTTGGTAACGTCGGTGGTGACCCGGAAACCCGCTACATGCCC 7341 || ||||||||||| || | || ||| |||| | ||||| || ||| |||| ||| Sbjct 16072 GTCAACAAAGTCATCCTCATCGGCAACCTCGGCCGCGACCCCGAGGTCCGTTACAACCCC 16013 Query 7342 AACGGCAATGC--GGTGACCAACATCACCCTCGCCACCAGCGAGAGCTGGAAGGACAAGC 7399 | |||| || |||| || |||| ||| ||||||| | | ||||||| || Sbjct 16012 AGCGGCGGCGCCTGGTG--CACGATCAGCCTGGCCACCACCCGCAACTGGAAGAACCGCG 15955 Query 7400 AGACCGGCCAGCAACAGGAACGCGCCGAGTTCCACCGCGTGGTGTTCTTCGGTCGCCTGG 7459 |||||||| | | |||||| |||| | ||||||||||| ||| || || ||| Sbjct 15954 AGACCGGCGAACGCCAGGAAGAGACCGAATGGCACCGCGTGGTTTTCAACGACCGTTTGG 15895 Query 7460 CGGAGATCGCCGGCGAGTACCTGCGCAAGGGTTCCCAGGTCTACGTCGAAGGCAGCCTGC 7519 | || || || ||||| |||||| ||||| || ||||||||||||||| ||||| Sbjct 15894 CTGAAATTGCTGGCGAATACCTGAAGAAGGGCCGCCCCGTCTACGTCGAAGGCCGCCTGA 15835 Query 7520 GCACCCGCAAGTGGCAGGCTCAGGACGGCCAGGACCGATACACCACCGAGGTAATCGTCG 7579 |||||||||||||||| |||| ||| ||||| |||||||||||| | || | || Sbjct 15834 AGACCCGCAAGTGGCAGGACAAGGAAGGCAAGGACACCTACACCACCGAGATCATTGCCG 15775 Query 7580 AC 7581 || Sbjct 15774 AC 15773 >seq53202 Length=9363 Score = 140 bits (154), Expect = 1e-28 Identities = 181/250 (72%), Gaps = 0/250 (0%) Strand=Plus/Plus Query 7282 GTTAACAAAGTCATTCTGGTTGGTAACGTCGGTGGTGACCCGGAAACCCGCTACATGCCC 7341 || || |||||||| | || || ||| | || | || ||||||| ||||||||||||| Sbjct 1824 GTGAATAAAGTCATCATCGTCGGCAACCTGGGGCGCGATCCGGAAATCCGCTACATGCCC 1883 Query 7342 AACGGCAATGCGGTGACCAACATCACCCTCGCCACCAGCGAGAGCTGGAAGGACAAGCAG 7401 | |||| | || | ||||||| || | |||||| | | ||| |||||| | Sbjct 1884 AGCGGCGACGCCATCGCCAACATTGCCGTGGCCACCTCGTTCCGTTCGAAAGACAAGAAC 1943 Query 7402 ACCGGCCAGCAACAGGAACGCGCCGAGTTCCACCGCGTGGTGTTCTTCGGTCGCCTGGCG 7461 |||||| |||| ||||| | |||| | |||||| | ||||||||| || ||||| Sbjct 1944 ACCGGCGAGCAGAAGGAAACCACCGAATGGCACCGCATCTCGTTCTTCGGCCGTCTGGCC 2003 Query 7462 GAGATCGCCGGCGAGTACCTGCGCAAGGGTTCCCAGGTCTACGTCGAAGGCAGCCTGCGC 7521 ||||||| ||| |||||||| || ||||| ||||||||| |||||| | |||| Sbjct 2004 GAGATCGTTGGCCAGTACCTGAAAAAAGGTTCGTCGGTCTACGTTGAAGGCCGTCTGCAG 2063 Query 7522 ACCCGCAAGT 7531 || ||||||| Sbjct 2064 ACGCGCAAGT 2073 >seq81523 Length=13279 Score = 98.7 bits (108), Expect = 4e-16 Identities = 94/118 (80%), Gaps = 2/118 (2%) Strand=Plus/Minus Query 53678 TCATCGCGGTACACGAACATGACGATGTCGGCGTCTTGCTCAATGGCGCCGGACTCGCGC 53737 || |||||||| | |||||||| ||||||||| || ||||| ||||||||||| |||||| Sbjct 2043 TCGTCGCGGTAGATGAACATGATGATGTCGGCATCCTGCTCGATGGCGCCGGATTCGCGC 1984 Query 53738 AGGTCGCTGAGGACCGGACGCTTGTCGGGGCGAGACTCGCACC-CTCGGTTTAGCTGG 53794 ||||| | | ||| |||||||||||||| ||| |||| ||||| |||||| Sbjct 1983 AGGTCAGACATCATCGGCCGCTTGTCGGGGCGCTGCTC-CACCGAGCGGTTGAGCTGG 1927 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 194561938932922