Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavaria_20fumosa_20[genbank_20GCA_5F001179745.1_202015-07-08] 111,201 sequences; 70,469,476 total letters Query= NC_028662.1 Length=50418 Score E Sequences producing significant alignments: (Bits) Value seq109290 91.5 5e-14 >seq109290 Length=7648 Score = 91.5 bits (100), Expect = 5e-14 Identities = 119/159 (75%), Gaps = 8/159 (5%) Strand=Plus/Plus Query 6733 TTCATCGCCCAGACCGGGCATGAGTCCGCAG-GCTTCA--ACGCCACCGAGGAGTACGCC 6789 ||||||||||| || ||||||||||| ||| | |||| ||||| ||| Sbjct 7192 TTCATCGCCCAACTCGCGCATGAGTCCGGTTCGCTGCTGTACGCA---GAGGAACTGGCC 7248 Query 6790 TCCGG-AGCGGCCTACGAGGGCCGCACGGATCTCGGCAACATCCACCCCGGTGACGGGGT 6848 ||| |||| |||||||||||||||| || |||||||||| ||| ||||| ||||| || Sbjct 7249 AGCGGCAGCG-CCTACGAGGGCCGCACCGACCTCGGCAACAGCCAGCCCGGCGACGGCGT 7307 Query 6849 CCGGTTCAAGGGCCGCACGTGGATCCAGATCACGGGACG 6887 || |||||||||||| ||||||| |||| || || Sbjct 7308 GCGCTTCAAGGGCCGCGGCCTGATCCAGCTCACCGGCCG 7346 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 161003112357560