Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavaria_20fumosa_20[genbank_20GCA_5F001179745.1_202015-07-08] 111,201 sequences; 70,469,476 total letters Query= NC_028672.1 Length=149732 Score E Sequences producing significant alignments: (Bits) Value seq23596 84.2 2e-11 >seq23596 Length=1734 Score = 84.2 bits (92), Expect = 2e-11 Identities = 205/301 (68%), Gaps = 10/301 (3%) Strand=Plus/Plus Query 16724 GCGATCGCATTAATGGTCAAGTCCCGGCGGGCCAAATCCTCTTCGATGGTCACATCTGGG 16783 ||||| || || ||||| | ||| || || ||| || ||||||| || || || ||| Sbjct 773 GCGATGGCGTTGATGGTGAGGTCACGCCGCACCAGGTCTTCTTCGAGCGTGACCTC-GGG 831 Query 16784 CTGAACATC-ACCTCGAAATCGTGGTATCCTG-CGC-CAGTTGAACGCTCGGTACGGGCC 16840 | | | | | |||| || |||| || | ||| | ||| || ||||| || || Sbjct 832 CGCGGCGTGGATCACGAAGCCGCGGTAGCCGGGCGCGCTTTTG--CGTTCGGTGCGCGCG 889 Query 16841 AGGGCGTACTCTTCCTTGGTCTCAGGATGCAGGTAAACTGGGAATGCGGCACCGACTTGC 16900 || ||||| ||||||| || | ||||||||| | || ||||| | ||||| | Sbjct 890 AGCGCGTATTCTTCCTGCGTTTTCGGATGCAGGAAGACCGGGAAGTCCTTGCCGACCGGG 949 Query 16901 TCGAAGCCGAGTGCCATCATCTCTTCGTGGGTGGAGCCGACCACAACGTAGTCACGGTCT 16960 |||||||| || | ||||| |||| |||| |||||| || |||| ||| |||| Sbjct 950 CGAAAGCCGAGCGCGAGCATCTGTTCGACCGTGGCGCCGACGACGACGTGGTCCTGGTCC 1009 Query 16961 TTGCTCT--CAACACCCATCAGTTCATCGCGGACCGCGCCGCCGACCAGATAGATTTTCA 17018 | || | ||| || | ||| | ||||| || ||||||||||| | ||| | |||| Sbjct 1010 T-GCACGGGCAAG-CCAAGCAGCGCGTCGCGCACGGCGCCGCCGACGACGTAGGTCTTCA 1067 Query 17019 T 17019 | Sbjct 1068 T 1068 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478348563996320