Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavaria_20fumosa_20[genbank_20GCA_5F001179745.1_202015-07-08] 111,201 sequences; 70,469,476 total letters Query= NC_028676.1 Length=149218 Score E Sequences producing significant alignments: (Bits) Value seq107653 260 1e-64 seq107518 113 4e-20 seq105722 95.1 1e-14 seq107811 89.7 5e-13 seq109536 82.4 7e-11 >seq107653 Length=176415 Score = 260 bits (288), Expect = 1e-64 Identities = 312/422 (74%), Gaps = 9/422 (2%) Strand=Plus/Minus Query 14080 GCATGGAGCATCTCTTCGTTACGCGTGTACTCGACCTGCTGAGCGGTGTCCTTCAGGATG 14139 ||||| |||||||| ||||| | ||||||| ||||||||| || |||||| |||||| | Sbjct 67868 GCATGAAGCATCTCCTCGTTTCTGGTGTACTTGACCTGCTGGGCCGTGTCCCTCAGGACG 67809 Query 14140 TTCTTCGCTCTGTTGAACCACGTGACCGTGTAGAACTGGCTGAACAGAGACACGTTCTCG 14199 || || | ||| | ||| || |||||||||| |||||| || ||||||||| Sbjct 67808 TTGTTGTAACGGTTCATCCATAGGATGACGTAGAACTGGGAGAACAGGGAGACGTTCTCG 67749 Query 14200 ATGAACAGAGTGAACAGAATCAGCGAGTAGACGTACTGAGCCTTTCGTT---CTTCTGAG 14256 | ||||| |||||||| || | | |||||||||||| ||| || | | || | Sbjct 67748 ACGAACAAGGTGAACAGGATGATGGCGTAGACGTACTG---CTTGCGCTTGTCATCGCCG 67692 Query 14257 AACG---TTTTGTTGTGCTTCTTCAGGTACTTCACGCGATTGATCACGACAGGAACCTTG 14313 | | | ||| || |||| ||||||| || || ||| | ||||| || | ||| Sbjct 67691 TATGCCCTCTTGAGGTACTTCCTCAGGTAGTTGACACGACCGGAGACGACCGGGAGCTTC 67632 Query 14314 AGGTTCTCTTCGAAGATCTCTTCGAGACCGAGCTTCTCGAGAAGCTTCTCGTACGCGCGA 14373 |||||||| ||||||| || ||| |||||||||||| ||||||||||| || | Sbjct 67631 AGGTTCTCCTCGAAGACGTCGAAGAGCTGGAGCTTCTCGAGCAGCTTCTCGTAGGCCAGG 67572 Query 14374 TTGTGAATCACCTCGGACTGAGCCAACGTGAACCCTACGTCCGAGATACACGGATGAGGC 14433 ||||| || |||||||| | |||| || ||| || | |||||| || | ||| || || Sbjct 67571 TTGTGGATGACCTCGGAGTTGGCCATCGCGAAGCCCAGGTCCGACATGCTCGGGTGGGGA 67512 Query 14434 AAGTTCTCGCCAACCTTCGCCCAGAAGGTCTTCACAGCAATCTCGATCTGTCCGATAGCC 14493 | ||||||||| | ||| |||||||| ||||| ||||| ||||||||||| ||||| ||| Sbjct 67511 AGGTTCTCGCCCAGCTTGGCCCAGAACGTCTTGACAGCGATCTCGATCTGGCCGATGGCC 67452 Query 14494 GA 14495 || Sbjct 67451 GA 67450 >seq107518 Length=40692 Score = 113 bits (124), Expect = 4e-20 Identities = 162/221 (73%), Gaps = 8/221 (4%) Strand=Plus/Plus Query 112670 GATCATGCCGAGAGCCTGGAGATAGGTGTCCAGGATAGCTTCCTGTTCCATGCGTTCATC 112729 |||||||||||| || | |||||| |||||| | |||||||| || |||||| | Sbjct 6961 GATCATGCCGAGTGCATTGAGATACAGGTCCAGCAACGCTTCCTGCTCTTCGCGTTCGGC 7020 Query 112730 AGCATCCTG-TCGACGAAGAGCAATGACCT--TTCGGAGAATCTTCGTGTCGAAGCCCAT 112786 |||||| | | || | | | |||||| ||| || ||||| || || | || | Sbjct 7021 CTTATCCTGCTTGCGGATGCGGA-TGACCTGCTTC--AGGATCTTGGTATCATATCCGGT 7077 Query 112787 CGACTTTGCTTCTCCGAAGACGTCCTTGATGTCATCGCCGATTGTCCGCTTCTCTTCTTC 112846 |||||| ||||| |||| |||||||| || ||| |||| ||| ||||||||||||| Sbjct 7078 CGACTTGGCTTCGGAATAGACATCCTTGATATCGTCGGCGATCGTCTGCTTCTCTTCTTC 7137 Query 112847 GAGGCGTTCGATACGCTCGATGAA-AGCTCTCAGCTGATCG 112886 || || ||||| ||||||| || ||| ||||||||||| Sbjct 7138 CAGTCGCTCGATCCGCTCGACAAATTGCT-TCAGCTGATCG 7177 >seq105722 Length=466 Score = 95.1 bits (104), Expect = 1e-14 Identities = 129/176 (73%), Gaps = 3/176 (2%) Strand=Plus/Plus Query 120232 CCTTCCAGGAACCAGAGAAGCTCGCTTACGACGGCTTCCCACTGCAGCTTCTTGGTAGTC 120291 ||||| |||||||| || |||||| | | || | | |||||||||||||| ||| Sbjct 254 CCTTC-AGGAACCACAGCAGCTCGATGAAGATCGAGCGCAGGTGCAGCTTCTTGGTGGTC 312 Query 120292 ATTGCAGGAAAGCCTTTGGCCAGATCAAAGCGGATCTGACGACCGAAAACAGATCGTGTG 120351 | | |||||||| |||||||| || ||||||||||| || ||||| || ||||| Sbjct 313 AGGACCGGAAAGCCCTTGGCCAGGTCGAAGCGGATCTGGCGGCCGAACACGCCGAGTGTG 372 Query 120352 CCTGTACCCGTTCGGTCTCCAGCG-TCTACACCGTTCGAGACGATGTCAACCAGCA 120406 || || ||||| || || || ||| | || ||||||| | |||||| | |||| Sbjct 373 CCCGTGCCCGTGCGATCGCC-GCGCTGGACGCCGTTCGCCAGGATGTCGGCGAGCA 427 >seq107811 Length=6275 Score = 89.7 bits (98), Expect = 5e-13 Identities = 211/311 (68%), Gaps = 6/311 (2%) Strand=Plus/Plus Query 119653 GGAAGCGGAAGAGGTTCACGTTCGAGCTGCTCTTTCACCTGGTCGAAGTGATTGAGGTAG 119712 || ||||| || || | || ||||||| || | ||||| || | ||| || ||| Sbjct 4201 GGCAGCGGCAGCGGGGCGCGCGCGAGCTGTTCGTCGACCTGCTCCATGTGGTTCGAATAG 4260 Query 119713 ATGTGCGTGTCTCCGAAGCTGCCGATCAGTTCGCCGACTTCGAGAT-TGCATTCTCGAGC 119771 | ||| ||| ||| | | | || | ||||| || |||||| ||| | || | || Sbjct 4261 AGGTGGCAGTCACCGCCGGTCCAGACGAAGTCGCCCACGTCGAGACCTGCCTGCT-GCGC 4319 Query 119772 AATGATGTGAGTCAGAAGAGCGTACGACGCGATGTTGAACGGAAGACCGAGGAACACATC 119831 || ||||| ||||| || |||||||| ||||| |||||||| | |||||||| | || Sbjct 4320 CATCATGTGCGTCAGCAGCGCGTACGAGGCGATATTGAACGGCACGCCGAGGAAGATGTC 4379 Query 119832 GACTGACCTCTGGTTCCAGATG-CACGAGAGCTTCTTGTTTCGTACGTAGAACTGGAA-A 119889 | | | ||||| | || || ||||||||||| | |||||||||||||| | Sbjct 4380 GGCGCTGCGCTGGTAC-AGCTGGCACGAGAGCTTGCCATCGGCGACGTAGAACTGGAACA 4438 Query 119890 GAGTAGTGACACGGAGGAAGAGACATCGATTCGATCTCAGGGACGTTCCATGCAGAAACC 119949 | | ||| || || || || |||| ||| || | ||||||||||| || || Sbjct 4439 GCG-CGTGGCAAGGCGGCAGTTTCATCTGCGGGATGTCGGCCACGTTCCATGCCGAGACG 4497 Query 119950 ATGTGGCGCCG 119960 ||| ||| || Sbjct 4498 ATGATGCGGCG 4508 >seq109536 Length=21924 Score = 82.4 bits (90), Expect = 7e-11 Identities = 138/200 (69%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 112671 ATCATGCCGAGAGCCTGGAGATAGGTGTCCAGGATAGCTTCCTGTTCCATGCGTTCATCA 112730 |||||| |||| || | |||||| ||| || | || |||||||| ||| || | Sbjct 2160 ATCATGTCGAGGGCGTTTAGATAGAGGTCAAGCAACGCCTCCTGTTCTTCGCGCTCGGCC 2101 Query 112731 GCATCCTGTCGACGAAGAGCAATGACCTTTCGGAGAATCTTCGTGTCGAAGCCCATCGAC 112790 |||||| || | | || ||| ||| ||||| |||||| |||| | Sbjct 2100 TTGTCCTGTTTCCGGATACGGATTACCCGCTTGAGGATCTTGGTGTCGTAGCCGGTGCTT 2041 Query 112791 TTTGCTTCTCCGAAGACGTCCTTGATGTCATCGCCGATTGTCCGCTTCTCTTCTTCGAGG 112850 ||||| || | |||| ||||||||||| ||| ||| | | |||| ||||| || ||| Sbjct 2040 TTTGCCTCGGAGTAGACATCCTTGATGTCGTCGGCGAGCGCCTGCTTTTCTTCCTCAAGG 1981 Query 112851 CGTTCGATACGCTCGATGAA 112870 |||||||| ||||||| ||| Sbjct 1980 CGTTCGATGCGCTCGACGAA 1961 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476706050288880