Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavaria_20fumosa_20[genbank_20GCA_5F001179745.1_202015-07-08] 111,201 sequences; 70,469,476 total letters Query= NC_028699.1 Length=40740 Score E Sequences producing significant alignments: (Bits) Value seq107715 122 2e-23 >seq107715 Length=35633 Score = 122 bits (134), Expect = 2e-23 Identities = 342/513 (67%), Gaps = 24/513 (5%) Strand=Plus/Plus Query 998 GATGGTCATCGGCTTTGGTTCCCGTAAAGAGGAATATGTCGACAGTACTGGT-GACCCTA 1056 |||||| | || || || || || |||||||| || |||||| | |||| ||||| | Sbjct 1234 GATGGTGGTGGGGTTCGGGTCGCGCAAAGAGGAGTACGTCGAC-GCGCTGGACGACCCGA 1292 Query 1057 AGGCGCTGCTCTGGAAGGCGCGCAAGTTTGTGGAGACGCTGCCCGTCGAGTTTCGTG--- 1113 || || || |||||||| |||| |||| ||| || |||||| || ||| | || Sbjct 1293 AGTCGTTGTTCTGGAAGCTGCGCCAGTTCGTGCAGTTGCTGCCGGTGGAGCTGCGGCCGG 1352 Query 1114 -GGTCATGGAATGAGAAGAAGCATGCACCGTACATGCG--TGTTGAATTTCCTGAGACAG 1170 || | | || || | ||||| || ||||||||| | || |||| || ||| | Sbjct 1353 CGGGCTTCGA-TGTGCGCAAGCACGCGCCGTACATGAGGCTGGTGAAC--CCGGAGCATG 1409 Query 1171 GCGCGGTCATCAAGGGCGAGGCTGGTGACAATATTGGACGTGGTGACCGAACCACACTCT 1230 |||||| | ||||||||| || || || || || || | || | ||| Sbjct 1410 GCGCGGCGGTGGTGGGCGAGGCGGGCACGAACATCGGGCGCGGCGCGCGGGCGGGCATCT 1469 Query 1231 ATCTGGTGGATGAGGCTGCATTTCTGCA-ACGCCCGCTACTGATTGATGCGGCGTTATCG 1289 | | ||||| ||||| || |||||| | | | | || || | | || |||||| | ||| Sbjct 1470 ACTTCGTGGACGAGGCGGCGTTTCTGGAGAAGGCGGCGACGG-TGGACGCGGCGCTGTCG 1528 Query 1290 CAAACCACCCGTTGCCGTATTGACCTGAGTTCGGTCAACGGCATGGCGAACCCGTTTGCG 1349 || | ||| |||| || ||||||| |||| || || || |||||||| Sbjct 1529 CAGAGCACGAACTGCCAGATCCACCTGAGCACGGTGAATGGGCCGGGCAACCCGTTCTAC 1588 Query 1350 CAGAAACGCCACGGCGGAAAGATACCGGTATTCACATTCCACTGGCGCAGCGACCCCCGT 1409 ||||| ||||||||||| || || ||| ||| |||||||| |||||| || Sbjct 1589 CAGAAGCGCCACGGCGGGCGCTGGCCAGTGTTCGTGTTCGACTGGCGCGACGACCCGCGC 1648 Query 1410 AAGGATGATGAGTGGTAT-CGCAGGGAATGCGAGAA-AATCGAC--AATCCGGTGGTAGT 1465 ||||| || | |||||| ||| ||||||| || | | |||| ||| || Sbjct 1649 AAGGACGAGGCCTGGTATGCGC-------GCGAGAAGGGGCGGCTGGAGCCGGAGGTTGT 1701 Query 1466 GGCTCAGGAGCTTGACCTGAACTACAGCGCATC 1498 || || ||| |||||| | |||||||||| || Sbjct 1702 CGCACAAGAGATTGACCGGGACTACAGCGCGTC 1734 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 130074408082124