Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavaria_20fumosa_20[genbank_20GCA_5F001179745.1_202015-07-08] 111,201 sequences; 70,469,476 total letters Query= NC_028768.1 Length=49714 Score E Sequences producing significant alignments: (Bits) Value seq107030 109 2e-19 seq109209 96.9 1e-15 >seq107030 Length=1639 Score = 109 bits (120), Expect = 2e-19 Identities = 75/85 (88%), Gaps = 0/85 (0%) Strand=Plus/Minus Query 36074 TGTATTCTGGTCGGAGTACTAGGATTCGAACCTAGGACCCTCTGCTCCCAAAGCAGATGC 36133 || ||| |||||||||||| ||||||||||||| |||||| ||| ||||||| ||| ||| Sbjct 1140 TGAATTTTGGTCGGAGTACAAGGATTCGAACCTTGGACCCCCTGGTCCCAAACCAGGTGC 1081 Query 36134 GCTACCTGACTGCGCTACACTCCGA 36158 |||||| |||||||| ||||||||| Sbjct 1080 GCTACCGGACTGCGCCACACTCCGA 1056 >seq109209 Length=24719 Score = 96.9 bits (106), Expect = 1e-15 Identities = 68/78 (87%), Gaps = 0/78 (0%) Strand=Plus/Plus Query 36081 TGGTCGGAGTACTAGGATTCGAACCTAGGACCCTCTGCTCCCAAAGCAGATGCGCTACCT 36140 ||||||| || | ||||||||||| |||||||||| ||||||| ||||||||||||| Sbjct 22863 TGGTCGGGGTGCACGGATTCGAACCGCGGACCCTCTGGTCCCAAACCAGATGCGCTACCA 22922 Query 36141 GACTGCGCTACACTCCGA 36158 ||||||||||||| |||| Sbjct 22923 GACTGCGCTACACCCCGA 22940 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 158753287206712