Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavaria_20fumosa_20[genbank_20GCA_5F001179745.1_202015-07-08] 111,201 sequences; 70,469,476 total letters Query= NC_028776.1 Length=59670 Score E Sequences producing significant alignments: (Bits) Value seq84563 125 3e-24 >seq84563 Length=11991 Score = 125 bits (138), Expect = 3e-24 Identities = 239/350 (68%), Gaps = 14/350 (4%) Strand=Plus/Minus Query 631 TATCCTATACCACGGAACTCGCGGTCCTGGAAAAACGGACTGCCAGCTTATGCGTTTCCG 690 ||| || || || || | || ||||||||||| || || |||||||||||| || || Sbjct 7009 TATTCTTTATCATGGCGCGCGTGGTCCTGGAAAGACCGATACCCAGCTTATGCGCTTTCG 6950 Query 691 TAAGAACGTTGGCGTAGGGTACGGTAAATTTTGGAAGGGTATTATATTCGACCGTGAATA 750 ||||| || | || |||||| ||| ||| || ||||| |||||||| || || Sbjct 6949 ACGTAACGTCGGTATTGGCTACGGTCCATTCTGGCGAGGCATTATCTTCGACCGCGAGTA 6890 Query 751 TAAAAACCTTGATGACCTTGTAACTAAATCCCAGCGTTGGTTTCCTGAATTTAAAGACGG 810 ||| | ||||| ||| | || ||||| | |||| |||||| | || ||||||| Sbjct 6889 TAAGCAGCTTGACGACTTGGTGACTAAGGCTAAGCGCTGGTTTATGCAGTTCCAAGACGG 6830 Query 811 GGCTAAATTCCT---TAGCTCTAAGTCTGATTATAAATGGGTTTGGCCTACAGGTGAAGA 867 ||| || || ||| || ||| || |||||| ||||||||| || || || Sbjct 6829 TGCTGTCTTTCTGGAAAGC---AATTCTACATACAAATGGCGTTGGCCTACTGGCGAGGA 6773 Query 868 GCTACTGTTCCGCGTTGCTTGTAAAGAA----AAGGATTACTGGTCTTATCACGGTCACG 923 | || ||||| || || ||| | || || ||| | ||||||||||| Sbjct 6772 ATTGCTTTTCCGAACGGC----AATGAAGCCGGATGACTATTGGAGCTTTCACGGTCACG 6717 Query 924 AATACCCATTTATCGGATGGAACGAATTAACAAAATATCCGGACGGGCGT 973 | || ||||| |||||||||||||| | || ||||| || || || ||| Sbjct 6716 AGTATCCATTCATCGGATGGAACGAGCTTACGAAATACCCCGATGGACGT 6667 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 190570416754784