Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavaria_20fumosa_20[genbank_20GCA_5F001179745.1_202015-07-08] 111,201 sequences; 70,469,476 total letters Query= NC_028796.1 Length=49203 Score E Sequences producing significant alignments: (Bits) Value seq109454 118 3e-22 seq36499 102 3e-17 seq81106 95.1 4e-15 seq109371 93.3 1e-14 >seq109454 Length=55839 Score = 118 bits (130), Expect = 3e-22 Identities = 104/130 (80%), Gaps = 0/130 (0%) Strand=Plus/Plus Query 42407 ACTGGGTGATTGTCGGCGGTGAGTCCGGCCCCGGTGCGCGGCCGATGCACCCTGACTGGG 42466 |||||||||| |||||| || ||||| | ||||||||||||| ||| | ||||| Sbjct 47887 ACTGGGTGATCTGCGGCGGCGAAAGCGGCCACCACGCGCGGCCGATGCTCCCCGCCTGGG 47946 Query 42467 CGCGGTCACTGCGAGACCAATGCCAGGCCGCCGGCGTGCCGTTCCTGTTCAAGCAGCGTG 42526 | || ||||| ||||| ||| ||||||||||||||||||||||||||||||| | | Sbjct 47947 CCCGAGACCTGCGCGACCAGTGCGAGGCCGCCGGCGTGCCGTTCCTGTTCAAGCAATGGG 48006 Query 42527 GTGAGTGGAC 42536 | |||||||| Sbjct 48007 GCGAGTGGAC 48016 >seq36499 Length=515 Score = 102 bits (112), Expect = 3e-17 Identities = 100/129 (78%), Gaps = 0/129 (0%) Strand=Plus/Plus Query 42406 GACTGGGTGATTGTCGGCGGTGAGTCCGGCCCCGGTGCGCGGCCGATGCACCCTGACTGG 42465 || ||||| | ||||| || || |||||| || || |||||||||||||| || ||| Sbjct 267 GATTGGGTCGTCGTCGGGGGCGAATCCGGCGATGGCGCACGGCCGATGCACCCAGAGTGG 326 Query 42466 GCGCGGTCACTGCGAGACCAATGCCAGGCCGCCGGCGTGCCGTTCCTGTTCAAGCAGCGT 42525 || || ||||| || || |||||| ||| ||||||||||| || || |||||||| | Sbjct 327 GCTCGATCACTCCGCGATCAATGCGCGGCTGCCGGCGTGCCATTTCTTTTCAAGCAATGG 386 Query 42526 GGTGAGTGG 42534 || |||||| Sbjct 387 GGCGAGTGG 395 >seq81106 Length=13242 Score = 95.1 bits (104), Expect = 4e-15 Identities = 101/131 (77%), Gaps = 2/131 (2%) Strand=Plus/Plus Query 42403 CTCGACTGGGTGAT-TGTCGGCGGTGAGTCCGGCCCCGGTGCGCGGCCGATGCACCCTGA 42461 ||||||||||| || ||| ||||| ||| ||||||| ||||| ||||||||||| | Sbjct 8758 CTCGACTGGGTCATCTGT-GGCGGCGAGAGCGGCCCCAAGGCGCGTCCGATGCACCCGGC 8816 Query 42462 CTGGGCGCGGTCACTGCGAGACCAATGCCAGGCCGCCGGCGTGCCGTTCCTGTTCAAGCA 42521 ||||| || || || || || ||| ||||||| ||||||||| |||||||||| Sbjct 8817 ATGGGCCCGAGGCCTCCGCGATCAGTGCGCGGCCGCCAAGGTGCCGTTCTTGTTCAAGCA 8876 Query 42522 GCGTGGTGAGT 42532 | | ||||||| Sbjct 8877 GTGGGGTGAGT 8887 >seq109371 Length=32687 Score = 93.3 bits (102), Expect = 1e-14 Identities = 98/129 (76%), Gaps = 0/129 (0%) Strand=Plus/Minus Query 42407 ACTGGGTGATTGTCGGCGGTGAGTCCGGCCCCGGTGCGCGGCCGATGCACCCTGACTGGG 42466 ||||| | || ||||| || ||| ||| || || ||||| ||||||||||| ||||| Sbjct 5633 ACTGGATCATCGTCGGAGGCGAGAGCGGGCCTGGCGCGCGTCCGATGCACCCCAGCTGGG 5574 Query 42467 CGCGGTCACTGCGAGACCAATGCCAGGCCGCCGGCGTGCCGTTCCTGTTCAAGCAGCGTG 42526 | || | ||||| ||||| ||| ||| ||| ||||| |||| | ||||||||| | | Sbjct 5573 CCCGCGCCCTGCGCGACCAGTGCGCGGCGGCCAGCGTGGCGTTTCACTTCAAGCAGTGGG 5514 Query 42527 GTGAGTGGA 42535 | ||||||| Sbjct 5513 GCGAGTGGA 5505 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 157120246507730