Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavaria_20fumosa_20[genbank_20GCA_5F001179745.1_202015-07-08] 111,201 sequences; 70,469,476 total letters Query= NC_028809.1 Length=58637 Score E Sequences producing significant alignments: (Bits) Value seq111010 205 3e-48 >seq111010 Length=53734 Score = 205 bits (226), Expect = 3e-48 Identities = 424/630 (67%), Gaps = 76/630 (12%) Strand=Plus/Plus Query 4529 CGCGC-GACCCAGGCGGCGGCGACCATGCGCATGGGCGGCGGCATCGGCTACGACTTCTC 4587 ||||| |||| ||||||| | ||| |||||| ||||||||| | |||||||||||| Sbjct 29266 CGCGCTGACCGAGGCGGCCGAGACGATGCGCCGTGGCGGCGGCGTGGGCTACGACTTCAG 29325 Query 4588 CACCCTGCGCCCCAAGGGCGACCTCATCG--TCAAGCTGCAGTCCCGCAGCTCCGGCCCC 4645 | | | ||||| || | | | | || | |||| | || |||||| || Sbjct 29326 CCGCATCCGCCCGGCCGGTGCCTGGGTGGGCTCCACGCGCAGCCATGC--CTCCGGGCCG 29383 Query 4646 ATCTCCTTCATGGAGATTTTCGAC-GCAGTCTGC----CGCTGCACGTCCTCGTCCGGCC 4700 ||| | |||| | |||||| ||||| ||| || || | | ||||| Sbjct 29384 ATCAGTTACATGCGCGTGTTCGACCGCAGT-TGCGAGACGGTGGAGAGCG----CCGGCA 29438 Query 4701 ACCGGCGTGGCGCGCAGATGGGCGTCCTGCGCATCGACCACCCCGACATCTTCGACTTCG 4760 ||| || ||||||||||||||||| |||||| |||||||||||||||| | |||| Sbjct 29439 GCCGCCGCGGCGCGCAGATGGGCGTGCTGCGCTGCGACCACCCCGACATCGAGGCCTTCA 29498 Query 4761 TCCGCGCCAAGCA-GAACGAGACCTTCCTGCGCGGCTTCAACATCTCCATCGCCGTCACG 4819 ||| ||||||| | ||| | ||||| |||| ||||||||||||||||| ||| || Sbjct 29499 TCCACGCCAAGGACGAAGGCGACCT----GCGCAACTTCAACATCTCCATCGGCGTGACC 29554 Query 4820 GACGAGTTCATGCGGGCCAAGCG---CGACGG------------------------CAAG 4852 |||| |||||| |||| || |||||| | || Sbjct 29555 GACGTCTTCATGGAGGCCGTGCAGGCCGACGGTCCCGTCGAGCTGGTGCATCGGGCCCAG 29614 Query 4853 CCCTTCC---AGCTGA------------------AGTTCGGCGGCCGC------GTCTAC 4885 ||| | ||| || || ||||| | || |||||| Sbjct 29615 CCCAGCGCCGAGCAGATCGAGGCCGGCGCCTACCAGCGCGGCGACGGCCTGTGGGTCTAC 29674 Query 4886 CGCGAGGTGGACCCCAACGAGCTGTGGGACGCGGTCATGCGCTCCACCTGGGACTGGGCC 4945 ||| ||||| | || |||||||||||| ||||||||||||||||| ||| ||| Sbjct 29675 CGCAAGGTGCGCGCCTGTGAGCTGTGGGACCAGGTCATGCGCTCCACCTACGACCACGCC 29734 Query 4946 GAGCCGGGCGTCCTGTTCATCGACCGCATCAAC-GAGATGAACAACCTCCACTACTGCGA 5004 ||||| ||||| || ||| | |||||||||||| | || |||||||| ||||||||||| Sbjct 29735 GAGCCCGGCGTGCTCTTCCTGGACCGCATCAACAGCGA-CAACAACCTGCACTACTGCGA 29793 Query 5005 GACCATCGCGGCGACCAACCCGTGCGGCGAGCAGCCGCTGCCACCGTTCGGCGCCTGCCT 5064 ||| |||||||||||||| || |||| |||||| ||||| || || | ||| |||| Sbjct 29794 GACGATCGCGGCGACCAATCCTTGCGCCGAGCAACCGCTTCCGCCCTATGGCTGCTGCTG 29853 Query 5065 GCTCGGCTCCTTCAACCTGGTGCGCTACGT 5094 || |||||| || ||||| ||||| ||| Sbjct 29854 CCTGGGCTCCATCGACCTGACGCGCTTCGT 29883 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 187269181838838