Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavaria_20fumosa_20[genbank_20GCA_5F001179745.1_202015-07-08] 111,201 sequences; 70,469,476 total letters Query= NC_028831.1 Length=61235 Score E Sequences producing significant alignments: (Bits) Value seq84563 131 7e-26 >seq84563 Length=11991 Score = 131 bits (144), Expect = 7e-26 Identities = 240/350 (69%), Gaps = 14/350 (4%) Strand=Plus/Minus Query 22534 TATCCTATACCACGGAACTCGCGGTCCTGGAAAAACGGACTGCCAGCTTATGCGTTTCCG 22593 ||| || || || || | || ||||||||||| || || |||||||||||| || || Sbjct 7009 TATTCTTTATCATGGCGCGCGTGGTCCTGGAAAGACCGATACCCAGCTTATGCGCTTTCG 6950 Query 22594 TAAGAATGTTGGTGTAGGGTACGGTAAATTTTGGAAGGGTATTATATTCGACCGTGAATA 22653 || || ||| | || |||||| ||| ||| || ||||| |||||||| || || Sbjct 6949 ACGTAACGTCGGTATTGGCTACGGTCCATTCTGGCGAGGCATTATCTTCGACCGCGAGTA 6890 Query 22654 TAAAAACCTTGATGACCTTGTAACTAAATCCCAGCGTTGGTTTCCTGAATTTAAAGACGG 22713 ||| | ||||| ||| | || ||||| | |||| |||||| | || ||||||| Sbjct 6889 TAAGCAGCTTGACGACTTGGTGACTAAGGCTAAGCGCTGGTTTATGCAGTTCCAAGACGG 6830 Query 22714 GGCTAAATTCCT---TAGCTCTAAGTCTGATTATAAATGGGTTTGGCCTACAGGTGAAGA 22770 ||| || || ||| || ||| || |||||| ||||||||| || || || Sbjct 6829 TGCTGTCTTTCTGGAAAGC---AATTCTACATACAAATGGCGTTGGCCTACTGGCGAGGA 6773 Query 22771 GCTACTTTTCCGCGTTGCTTGTAAAGAA----AAGGATTACTGGTCTTATCACGGTCACG 22826 | |||||||| || || ||| | || || ||| | ||||||||||| Sbjct 6772 ATTGCTTTTCCGAACGGC----AATGAAGCCGGATGACTATTGGAGCTTTCACGGTCACG 6717 Query 22827 AATACCCATTTATCGGATGGAACGAATTAACAAAATATCCGGACGGGCGT 22876 | || ||||| |||||||||||||| | || ||||| || || || ||| Sbjct 6716 AGTATCCATTCATCGGATGGAACGAGCTTACGAAATACCCCGATGGACGT 6667 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 195571803631314