Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavaria_20fumosa_20[genbank_20GCA_5F001179745.1_202015-07-08] 111,201 sequences; 70,469,476 total letters Query= NC_028832.1 Length=61511 Score E Sequences producing significant alignments: (Bits) Value seq108438 95.1 5e-15 seq110673 82.4 3e-11 >seq108438 Length=3402 Score = 95.1 bits (104), Expect = 5e-15 Identities = 111/148 (75%), Gaps = 4/148 (3%) Strand=Plus/Plus Query 54587 GCCAGCATGCCGTTCGTGTATCCGCACGTCGCACTCATGCCCGACGCACATTTCGGCAAA 54646 ||| || |||| |||| | |||| |||| ||||| |||| |||| ||||| Sbjct 2986 GCCCGCCTGCCCATCGTCTTCAAGCACATCGCCGCGATGCCGGACGTGCATTACGGCATC 3045 Query 54647 GGCAGCTCGGTCGGCACAGTCATCCCCACC--CAAGGCGCCGTCATCCCGGCCGCCGTCG 54704 ||| | |||||| | |||||||||||| |||| ||| |||||||||| ||||| | Sbjct 3046 GGCGCGACCGTCGGCTCGGTCATCCCCACCATCAAG--GCCATCATCCCGGCGGCCGTGG 3103 Query 54705 GCGTCGACATCGGCTGCGGCATGATCGC 54732 | || |||||||||||||||||||| || Sbjct 3104 GTGTGGACATCGGCTGCGGCATGATGGC 3131 >seq110673 Length=5201 Score = 82.4 bits (90), Expect = 3e-11 Identities = 123/170 (72%), Gaps = 6/170 (4%) Strand=Plus/Minus Query 54566 CTGAAGCAAGCCGAACAAACCG-CCAGCATGCCGTTCGTGTATCCGCACGTCGCACTCAT 54624 |||||||| || | ||| || |||| ||||| | |||| |||||| || ||| Sbjct 945 CTGAAGCA-GCTGGCCAACGCGGCCAGGCTGCCGGTGGTGTTCAAGCACGTGGCGGCCAT 887 Query 54625 GCCCGACGCACATTTCGGCAAAGGCAGCTCGGTCGGCACAGTCATCCCCACCC--AAGGC 54682 |||||||| || | |||| || | || ||| | || ||||| || | ||||| Sbjct 886 GCCCGACGTGCACGTGGGCATCGGTGCGACCGTGGGCTCGGTGATCCCGACGCTCAAGGC 827 Query 54683 GCCGTCATCCCGGCCGCCGTCGGCGTCGACATCGGCTGCGGCATGATCGC 54732 | |||||||||| ||||| ||||| |||||||||||||||||||| || Sbjct 826 --CATCATCCCGGCGGCCGTGGGCGTGGACATCGGCTGCGGCATGATGGC 779 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 196453837355226