Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavaria_20fumosa_20[genbank_20GCA_5F001179745.1_202015-07-08] 111,201 sequences; 70,469,476 total letters Query= NC_028834.1 Length=48216 Score E Sequences producing significant alignments: (Bits) Value seq107030 105 2e-18 seq109209 98.7 3e-16 >seq107030 Length=1639 Score = 105 bits (116), Expect = 2e-18 Identities = 72/81 (89%), Gaps = 0/81 (0%) Strand=Plus/Minus Query 36266 TTTTGGTCGGAGTACTAGGATTCGAACCTAGGACCCTCTGCTCCCAAAGCAGATGCGCTG 36325 ||||||||||||||| ||||||||||||| |||||| ||| ||||||| ||| |||||| Sbjct 1136 TTTTGGTCGGAGTACAAGGATTCGAACCTTGGACCCCCTGGTCCCAAACCAGGTGCGCTA 1077 Query 36326 CCAGACTGCGCTACACTCCGA 36346 || |||||||| ||||||||| Sbjct 1076 CCGGACTGCGCCACACTCCGA 1056 >seq109209 Length=24719 Score = 98.7 bits (108), Expect = 3e-16 Identities = 69/79 (87%), Gaps = 0/79 (0%) Strand=Plus/Plus Query 36268 TTGGTCGGAGTACTAGGATTCGAACCTAGGACCCTCTGCTCCCAAAGCAGATGCGCTGCC 36327 |||||||| || | ||||||||||| |||||||||| ||||||| |||||||||| || Sbjct 22862 TTGGTCGGGGTGCACGGATTCGAACCGCGGACCCTCTGGTCCCAAACCAGATGCGCTACC 22921 Query 36328 AGACTGCGCTACACTCCGA 36346 |||||||||||||| |||| Sbjct 22922 AGACTGCGCTACACCCCGA 22940 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 153966017212436