Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavaria_20fumosa_20[genbank_20GCA_5F001179745.1_202015-07-08] 111,201 sequences; 70,469,476 total letters Query= NC_028876.1 Length=109800 Score E Sequences producing significant alignments: (Bits) Value seq108422 125 5e-24 seq108124 98.7 7e-16 >seq108422 Length=3279 Score = 125 bits (138), Expect = 5e-24 Identities = 239/344 (69%), Gaps = 11/344 (3%) Strand=Plus/Minus Query 96522 CGTCGGATACGAAAGCGCCCTGTATCCGGATGG-CACCCCGCGCCCCCACGGGCAGGAAT 96580 ||||| || || ||||| || | ||||||| || ||| || | ||||| | | Sbjct 2175 CGTCGCTGACAAAGGCGCCGTGCACGCGGATGGGCAGACCGGTGCCGGA-GGGCATGTAC 2117 Query 96581 AACCCGTCACCCATTCCCATGAGCTGCTCGGCTCCGCCCTCGTCCAGGATCACCCGGCTA 96640 | | ||| ||||| |||| ||| |||||| || || ||| ||||| ||||| Sbjct 2116 AGCATGTCGCCCATGCCCAGCAGCGCCTCGGCACCCATCTGGTCGAGGATGGTGCGGCTG 2057 Query 96641 TCGGTGAGTGATGCTG---TGGCGAACGAGAGCCTAGACGGCACGTTGGATTTGATAAGG 96697 ||| | || |||| ||| || || || | | ||| | ||||| ||||| ||| Sbjct 2056 TCGATCTTGGA-GCTGACCTGG--AAGGACAGGCGCGTCGGGATGTTGGCCTTGATGAGG 2000 Query 96698 CCTGTGACTACATCCACGGAGGGCCGCTGCGTCGCCAGGACGAGATGAATACCGGCTGCG 96757 || |||| || ||||| || ||||||||||||||||||| || || || ||||| ||| Sbjct 1999 CCGGTGATGACGTCCACCGACGGCCGCTGCGTCGCCAGGATCAGGTGGATGCCGGCCGCG 1940 Query 96758 CGCGCCTTCTGGGCGATGCGGACAATGTTGGCCTCGACTTCTTTCTTGTAGCCGCCCATC 96817 ||||| ||||| || | |||| | || |||||| || |||||| | ||||| Sbjct 1939 CGCGCTTTCTGCGCCAGGCGGGCGATCAGCTCCTCGA--TC-TTCTTGCCAACCACCATC 1883 Query 96818 ATGAGGTCTGCGAGTTCGTCGACCACTACCACGATGTAGGGGAG 96861 || ||||| || || ||||||| || || |||||| |||| || Sbjct 1882 ATCAGGTCGGCCAGCTCGTCGATGACGACGACGATGAAGGGTAG 1839 >seq108124 Length=5758 Score = 98.7 bits (108), Expect = 7e-16 Identities = 112/150 (75%), Gaps = 3/150 (2%) Strand=Plus/Minus Query 96689 TTGATAAGGCCTGTGACTACATCCACGGAGGGCCGCTGCGTCGCCAGGACGAGATGAATA 96748 ||||| ||||| || | || || || || ||||||||||||||||||| || || | Sbjct 147 TTGATCAGGCCGGTAATCACGTCGACCGATGGCCGCTGCGTCGCCAGGATCAGGTGCAGG 88 Query 96749 CCGGCTGCGCGCGCCTTCTGGGCGATGCGGACAATGTTGGCCTCGACTTCTTTCTTGTAG 96808 ||||| |||||||||||||||||||| || | || |||||| | |||||| | Sbjct 87 CCGGCCGCGCGCGCCTTCTGGGCGATACGCGCGATCAACTCCTCGA---CCTTCTTGCCG 31 Query 96809 CCGCCCATCATGAGGTCTGCGAGTTCGTCG 96838 | ||||||| ||||| || || |||||| Sbjct 30 ACCACCATCATCAGGTCGGCCAGCTCGTCG 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 350759184214521