Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavaria_20fumosa_20[genbank_20GCA_5F001179745.1_202015-07-08] 111,201 sequences; 70,469,476 total letters Query= NC_028882.1 Length=84583 Score E Sequences producing significant alignments: (Bits) Value seq107653 100 2e-16 seq109371 95.1 7e-15 >seq107653 Length=176415 Score = 100 bits (110), Expect = 2e-16 Identities = 152/214 (71%), Gaps = 12/214 (6%) Strand=Plus/Plus Query 65818 CTACTACCAGGTAGAGGTCCGAAACCCCACCTCTGGCG---GGGAGCCCTACATAGGGGA 65874 |||||||||||| ||| || | ||||| | || |||| || ||| | | || Sbjct 44242 CTACTACCAGGTGGAGATCAAGGATCCCACGACACCCGACCGGGACCCGTACGTCGCTGA 44301 Query 65875 GTGCAACGATTTTATCGAAGCACTGGGCATGACCTTCGCCGAAGCGAACGTGTTCAAGGC 65934 ||||||||| | ||||| || |||||||||||||||||||| | |||| |||||||| Sbjct 44302 GTGCAACGACATCATCGAGGCTCTGGGCATGACCTTCGCCGAGGGCAACGCCTTCAAGGC 44361 Query 65935 AATCTGGCGA---AAAGCAGCCGAGCGCACCTTGGGTAAGAAAAAGAAGGGCAACA---A 65988 ||||||||| |||||| || || |||| ||| ||||| ||| | Sbjct 44362 CATCTGGCGATCCTGCGCAGCC---CGGTCCCTGGGGCTCTCCAAGGAGGGCTACAAGGA 44418 Query 65989 CGCTGTCTATGACGCCGAGAAGATGGTATTCTTC 66022 || ||||| ||| |||||||| |||| |||||| Sbjct 44419 CGGGGTCTACGACTCCGAGAAGGTGGTCTTCTTC 44452 >seq109371 Length=32687 Score = 95.1 bits (104), Expect = 7e-15 Identities = 166/242 (69%), Gaps = 0/242 (0%) Strand=Plus/Minus Query 9675 TACGCCTACTTCGGTGTTAACCCCAGCACGGCGGATGCCAGTACAGACGATGCTACCGTC 9734 ||||||| |||||| || ||||||||||| || || |||| |||||| || || || Sbjct 1812 TACGCCTTCTTCGGCGTCAACCCCAGCACAGCCGACGCCACCGAAGACGACGCGACGGTG 1753 Query 9735 CGAAAGTGGCGAGGCTTCACCGAGAGAAATGGAGGCCACAAGTTCATTGTAGGGAACGTC 9794 || |||||| |||||| | | || ||||| ||||| || || ||||| Sbjct 1752 CGCAAGTGGACCGGCTTCGTCAAAGCCTGGGGCGGCCAGCGCTTCATCGTCGGCAACGTG 1693 Query 9795 TTCTGCTATCGGGCCACCGACGTGAAAGAGCTGCGAAAAGTGGACGACCCGTTCGGACCT 9854 ||| |||||| |||||||||||| || ||| ||| ||||| |||||||| Sbjct 1692 TTCGCCTATCGCGCCACCGACGTGCGCGACCTGGCCGGAGTAGACGATCCGTTCGGCGAC 1633 Query 9855 GAAAGCGTGGATTACTTCCAGTCCATCCTGGCCGAAGCTGACATCCTGGTGCCGTGCTGG 9914 || | || || || || |||| | ||| || |||||||| || || |||||| Sbjct 1632 GAGATCGGCGAACACATCACCGACATCATCTGCGAGGCCGACATCCTCGTCCCCTGCTGG 1573 Query 9915 GG 9916 || Sbjct 1572 GG 1571 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 270174146283584