Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavaria_20fumosa_20[genbank_20GCA_5F001179745.1_202015-07-08] 111,201 sequences; 70,469,476 total letters Query= NC_028892.1 Length=49949 Score E Sequences producing significant alignments: (Bits) Value seq108213 141 3e-29 seq37734 118 3e-22 seq108967 114 4e-21 seq56696 109 2e-19 seq67610 96.9 1e-15 seq2779 95.1 4e-15 seq83405 82.4 2e-11 >seq108213 Length=2622 Score = 141 bits (156), Expect = 3e-29 Identities = 260/378 (69%), Gaps = 10/378 (3%) Strand=Plus/Minus Query 38950 TCCAGCACGCGGGCCGCGTCCTTCATCGCG---TTGCGCGCCTTGATCCGTCCGTACGTC 39006 || ||||||||| | |||| |||||| ||| |||| ||| ||| | || Sbjct 1850 TCGAGCACGCGGCCGACGTCGCGGATCGCGCCCTTGGCCGCC---ATCGTACCGAAGGTG 1794 Query 39007 GCGATCTGTGCGACCTTGTCACTGCCGTACTTCTCGGTGACGTACCGGATCACGTCGCCA 39066 |||||||| | |||| ||| |||||||| || | |||| | |||||||| | | Sbjct 1793 GCGATCTGCGAGACCGCGTCCTTGCCGTACAAATCCTTCACGTGCTGGATCACGCGGTCG 1734 Query 39067 CGGCGA--CGGTCATCGAAGTCGATGTCCACGTCGGGCATGGAGACACGCTCAGGGTTCA 39124 || | | | || |||||||||||| | ||||||||| || || || || || || | Sbjct 1733 CGCCCTTCCTGGCA--GAAGTCGATGTCGAAGTCGGGCATCGACACGCGTTCGGGATTGA 1676 Query 39125 GGAACCGCTCGAAGATGAGCCCGTGAGGGATGGGGTCCAGGTCGGTGATCCCGAGGGCGT 39184 |||| |||||||| | || || ||| || || |||||||||||| || | || Sbjct 1675 GGAAGCGCTCGAACAGCAGATTGTACTGGAGCGGATCGAGGTCGGTGATCAGCAGCGAGT 1616 Query 39185 ACGCGGCCAGCGAGCCAGCCGCAGAGCCGCGCCCAGGGCCGACCCACACGCCGTTCTCCT 39244 | || ||||||| || || | || || || || || || ||| ||| || ||||||| Sbjct 1615 AGGCCACCAGCGAACCGGCGCCCGAACCACGGCCCGGCCCCACCGGCACACCATTCTCCT 1556 Query 39245 TCGCCCAGCCGATGAAGTCGGCGACGACGAGGAAGTACGACGGGAACCCCATCTGGTTGA 39304 | ||||| |||||| ||||| |||| |||||||| ||||| ||| | || Sbjct 1555 TGGCCCACTTGATGAATTCGGCCACGATCAGGAAGTAGCCGGGGAATTTCATATTACAGA 1496 Query 39305 TCATGTCGATCTCGTACT 39322 || ||||| ||||| ||| Sbjct 1495 TCGTGTCGGTCTCGAACT 1478 >seq37734 Length=186 Score = 118 bits (130), Expect = 3e-22 Identities = 136/183 (74%), Gaps = 0/183 (0%) Strand=Plus/Plus Query 39099 GGGCATGGAGACACGCTCAGGGTTCAGGAACCGCTCGAAGATGAGCCCGTGAGGGATGGG 39158 ||||||||| || ||||| ||||||||||| ||||| || | || || | | || Sbjct 1 GGGCATGGACACCCGCTCCGGGTTCAGGAAGCGCTCAAACAGCAGGTTGTAGCGCAGCGG 60 Query 39159 GTCCAGGTCGGTGATCCCGAGGGCGTACGCGGCCAGCGAGCCAGCCGCAGAGCCGCGCCC 39218 ||||||||| |||||| || || || ||| |||||||||| || | ||||| || || Sbjct 61 GTCCAGGTCCGTGATCAGCAGCGCATAGGCGACCAGCGAGCCGGCACCGGAGCCCCGGCC 120 Query 39219 AGGGCCGACCCACACGCCGTTCTCCTTCGCCCAGCCGATGAAGTCGGCGACGACGAGGAA 39278 |||||||| |||||| |||| ||||||| ||||||||| | |||| ||||| Sbjct 121 CGGGCCGACAGGGCAGCCGTTTGCCTTGGCCCAGCGGATGAAGTCCGACACGATCAGGAA 180 Query 39279 GTA 39281 ||| Sbjct 181 GTA 183 >seq108967 Length=4619 Score = 114 bits (126), Expect = 4e-21 Identities = 232/343 (68%), Gaps = 6/343 (2%) Strand=Plus/Plus Query 38942 AGGGCTTGTCCAGCACGCGGGCCGCGTCCTTCATCGCGTTGCGCGCCTTGATCCGTCCGT 39001 ||||| | | || |||||| | |||| || | || |||||||| || | |||| Sbjct 4279 AGGGCATCTGCAAAACGCGGCCGACGTCGCGCAGCACGGCGCGCGCCTGGAGCGTTCCGA 4338 Query 39002 ACGTCGCGATCTGTGCGACCTTGTCACTGCCGTACTTCTCGGTGACGTACCGGATCACGT 39061 | || |||||| || |||| || | ||| || || || |||||| || || || | Sbjct 4339 AAGTAATGATCTGCGCAACCTGATCGCGGCCATATTTTTCCTGGACGTAGCGAATAACCT 4398 Query 39062 CGCCACGGCGACGGTCATCGAAG---TCGATGTCCACGTCGGGCATGGAGACACGCTCAG 39118 || | ||| ||||| | | || ||||| || | || ||||| || || ||||| | Sbjct 4399 CGTC---GCGCCGGTCCTGGCAGAAATCGATATCGAAATCCGGCATCGACACGCGCTCCG 4455 Query 39119 GGTTCAGGAACCGCTCGAAGATGAGCCCGTGAGGGATGGGGTCCAGGTCGGTGATCCCGA 39178 |||||||||| |||||||| | ||| | ||| || ||||| |||||||| | Sbjct 4456 GGTTCAGGAAGCGCTCGAACAGAAGCGCAAACCGGAGCGGATCCAGATCGGTGATGGTCA 4515 Query 39179 GGGCGTACGCGGCCAGCGAGCCAGCCGCAGAGCCGCGCCCAGGGCCGACCCACACGCCGT 39238 | || | || || | |||||| || | || || || || || || || | |||| Sbjct 4516 GCGCCCAGGCCGCGACCGAGCCCGCACCCGACCCACGTCCCGGTCCAACAGGAATGCCGC 4575 Query 39239 TCTCCTTCGCCCAGCCGATGAAGTCGGCGACGACGAGGAAGTA 39281 | |||||||||| ||||||||| | |||| |||||||| Sbjct 4576 GCGCCTTCGCCCATTTGATGAAGTCCGACACGATCAGGAAGTA 4618 Score = 91.5 bits (100), Expect = 5e-14 Identities = 219/324 (68%), Gaps = 12/324 (4%) Strand=Plus/Plus Query 37930 GCCGCCATGTACTCGGCCGGGTAGTGCGTCTTCAGGTACGCCGTGCGGTAGGCGATGAGT 37989 ||||||||| | ||| |||| | | || |||||| || ||||| | ||||| | ||| Sbjct 3312 GCCGCCATGAATTCGACCGGAAAATTCGCCTTCAGATAGGCCGTTTGATAGGCAACGAGC 3371 Query 37990 CCGTACGCCGCAGAGTGCGCCTTGTTGAAGGCGTACCCGGCGAAGGGTACGAGCACGTCC 38049 | || ||||| | |||| |||||||||| |||| ||||||| | |||| || Sbjct 3372 GCATAGGCCGCCGCATGCGACTTGTTGAAGCCGTAGTCGGCGAATTTCGCAAGCAGATCG 3431 Query 38050 CACACCGCC-CGGATGGCAGCCTC--CGAGTAGCCTCGCTCGCTCGCCCCCTTCTGGAAG 38106 | | || ||| || |||| | || ||| || | || ||||| ||| Sbjct 3432 AAAATCGTATCGGCCTGC-GCCTTTTCAAGCC-CCTGACTGACG-GCGCCCTTGACGAAA 3488 Query 38107 TTCACGAACTCCTTGGCCAGCACCTCGGGCTT---CTTCTTGCCCATGGCGCGACGGAGG 38163 | || || | || || ||||| ||| |||||||||||| ||||| ||||| Sbjct 3489 CGCTCGCGCTGC---GCATCCATCTCGGCCTTGATCTTCTTGCCCATCGCGCGCCGGAGA 3545 Query 38164 AGGTCGGCCTGACCGAGGGTGTACCCGGCCAGGATCTGCGCCGCCTTCTGCACCTGCTCC 38223 || ||||||| ||||| | || || | |||||||||||| || | |||||| ||| Sbjct 3546 AGATCGGCCTCGCCGAGCGAATAGCCCGACAGGATCTGCGCAATCTGCATCACCTGTTCC 3605 Query 38224 TGGTAGATGATGAGCCCGAAGGTC 38247 || |||| ||||| ||| | ||| Sbjct 3606 TGATAGACGATGATGCCGTAAGTC 3629 >seq56696 Length=1533 Score = 109 bits (120), Expect = 2e-19 Identities = 144/200 (72%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 39099 GGGCATGGAGACACGCTCAGGGTTCAGGAACCGCTCGAAGATGAGCCCGTGAGGGATGGG 39158 ||||||||| || ||||| |||||||||||||| ||||| | | | || | | || Sbjct 1533 GGGCATGGACACCCGCTCCGGGTTCAGGAACCGTTCGAACAGCAACTTGTACTGCAGCGG 1474 Query 39159 GTCCAGGTCGGTGATCCCGAGGGCGTACGCGGCCAGCGAGCCAGCCGCAGAGCCGCGCCC 39218 |||||||||||| ||| || || || || ||||||| || || ||||||| || || Sbjct 1473 GTCCAGGTCGGTAATCTTCAGCGCATAAGCCACCAGCGAACCGGCACCAGAGCCCCGGCC 1414 Query 39219 AGGGCCGACCCACACGCCGTTCTCCTTCGCCCAGCCGATGAAGTCGGCGACGACGAGGAA 39278 || || ||| ||| || ||| |||||| ||||||||| | |||| | ||| Sbjct 1413 TGGCCCCACCGGGCAGCCATTGAGCTTGGCCCAGTTGATGAAGTCCCCCACGATCAAGAA 1354 Query 39279 GTACGACGGGAACCCCATCT 39298 ||| |||||| ||||||| Sbjct 1353 GTAGCCCGGGAAGCCCATCT 1334 >seq67610 Length=141 Score = 96.9 bits (106), Expect = 1e-15 Identities = 89/113 (79%), Gaps = 0/113 (0%) Strand=Plus/Plus Query 38123 CCAGCACCTCGGGCTTCTTCTTGCCCATGGCGCGACGGAGGAGGTCGGCCTGACCGAGGG 38182 ||| | |||| ||||||||| ||||| ||||| || || |||||||||| ||||||| Sbjct 29 CCATCTCCTCCTTCTTCTTCTTACCCATCGCGCGGCGCAGAAGGTCGGCCTCACCGAGGC 88 Query 38183 TGTACCCGGCCAGGATCTGCGCCGCCTTCTGCACCTGCTCCTGGTAGATGATG 38235 |||| || ||||||||||| || || | |||||| ||||| |||| |||| Sbjct 89 TGTAGCCCGCCAGGATCTGGGCGATCTGCATCACCTGTTCCTGATAGACGATG 141 >seq2779 Length=230 Score = 95.1 bits (104), Expect = 4e-15 Identities = 102/135 (76%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 38102 GGAAGTTCACGAACTCCTTGGCCAGCACCTCGGGCTTCTTCTTGCCCATGGCGCGACGGA 38161 |||| ||| || | || ||||| |||||| ||||||||| ||||||||||| || | Sbjct 91 GGAACTTCTCGCGGTGCTCGGCCATTTCCTCGGCCTTCTTCTTACCCATGGCGCGGCGCA 150 Query 38162 GGAGGTCGGCCTGACCGAGGGTGTACCCGGCCAGGATCTGCGCCGCCTTCTGCACCTGCT 38221 | ||| || ||||| | ||| ||| ||||||||||||| | || | |||||||| Sbjct 151 ACATGTCCGCGCCGCCGAGCGAGTAGCCGCCCAGGATCTGCGCGGTCTGCATCACCTGCT 210 Query 38222 CCTGGTAGATGATGA 38236 ||||||||| |||| Sbjct 211 CCTGGTAGACCATGA 225 >seq83405 Length=280 Score = 82.4 bits (90), Expect = 2e-11 Identities = 98/133 (74%), Gaps = 0/133 (0%) Strand=Plus/Minus Query 38139 CTTCTTGCCCATGGCGCGACGGAGGAGGTCGGCCTGACCGAGGGTGTACCCGGCCAGGAT 38198 |||||||||||| ||||| || || | ||| || || | | |||| ||| |||| | Sbjct 280 CTTCTTGCCCATCGCGCGGCGCAGCATGTCCGCGCCGCCCAAGCTGTAGCCGCCCAGCAC 221 Query 38199 CTGCGCCGCCTTCTGCACCTGCTCCTGGTAGATGATGAGCCCGAAGGTCGGGTCCAGGAT 38258 ||| ||||||| | ||||||||||||||||| || || ||| ||||| ||||| | Sbjct 220 CTGGGCCGCCTGCATCACCTGCTCCTGGTAGACGAAGACGCCGTAGGTCTCCTCCAGCAC 161 Query 38259 CTCGGCCAGCGGC 38271 || | | ||| || Sbjct 160 CTGGCCGAGCAGC 148 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 159504294181782