Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavaria_20fumosa_20[genbank_20GCA_5F001179745.1_202015-07-08] 111,201 sequences; 70,469,476 total letters Query= NC_028931.1 Length=55108 Score E Sequences producing significant alignments: (Bits) Value seq111010 188 3e-43 >seq111010 Length=53734 Score = 188 bits (208), Expect = 3e-43 Identities = 628/960 (65%), Gaps = 94/960 (10%) Strand=Plus/Plus Query 4130 CCGGCCACCGCCGTGGCGCCCAGATGGGCGTCATGCGCATCGACCACCCCGACATCTTCG 4189 ||||| |||||| ||||| ||||||||||| ||||| |||||||||||||||| | Sbjct 29433 CCGGCAGCCGCCGCGGCGCGCAGATGGGCGTGCTGCGCTGCGACCACCCCGACATCGAGG 29492 Query 4190 AGTTCATCCACGCCAAGCAGAACGAGCACTTCCTGCGCGGCTTCAATATCTCCATCGCCG 4249 ||||||||||||||| | ||| | ||||||| |||||| |||||||||| || Sbjct 29493 CCTTCATCCACGCCAAGGA---CGAAGGCGACCTGCGCAACTTCAACATCTCCATCGGCG 29549 Query 4250 TCACCGACGAGTTCATGGAG----TGCAAGCGG-----------GA----------CGG- 4283 | ||||||| ||||||||| |||| || | || ||| Sbjct 29550 TGACCGACGTCTTCATGGAGGCCGTGCAGGCCGACGGTCCCGTCGAGCTGGTGCATCGGG 29609 Query 4284 -CAAGCC--GTTCC-AGCTGA------------------AGTGGGGCG--GGC----GCG 4315 | |||| | || ||| || || | |||| ||| | | Sbjct 29610 CCCAGCCCAGCGCCGAGCAGATCGAGGCCGGCGCCTACCAGCGCGGCGACGGCCTGTGGG 29669 Query 4316 TCTACCGCGAGGTCGACCCCAACGAGCTGTGGGACGCTGTCATGCGCTCCACCTGGGACT 4375 |||||||| |||| | || |||||||||||| |||||||||||||||| ||| Sbjct 29670 TCTACCGCAAGGTGCGCGCCTGTGAGCTGTGGGACCAGGTCATGCGCTCCACCTACGACC 29729 Query 4376 GGGCCGAGCCGGGCGTCCTGTTCATCGACACCATCAACCGCATGAACAATCTCTGGTACT 4435 |||||||| ||||| || ||| | ||| ||||||| || ||||| || |||| Sbjct 29730 ACGCCGAGCCCGGCGTGCTCTTCCTGGACCGCATCAACAGCGACAACAACCTGCACTACT 29789 Query 4436 GCGAGGAGATTGCGGCCACCAACCCGTGCGGCGAGCAGCCGCTGCCTCCGTTCGGCGCCT 4495 ||||| ||| ||||| ||||| || |||| |||||| ||||| || || | ||| || Sbjct 29790 GCGAGACGATCGCGGCGACCAATCCTTGCGCCGAGCAACCGCTTCCGCCCTATGGCTGCT 29849 Query 4496 GCCTGCTTGGCTCCTTCAACCTGGTGCGCTATCTGCGGCGCGACATGGT---TG----GC 4548 || || |||||| || ||||| ||||| | ||||||| | | || | Sbjct 29850 GCTGCCTGGGCTCCATCGACCTGACGCGCT---TCGTGCGCGACCCGTTCAGTGCGAAAC 29906 Query 4549 TGGTCCTTCGACTGGTGCCAG-CTCGCCGAGGACATCCCGGTCGTCGTGCGCGCCATGGA 4607 ||| ||||||| | || | || |||| | | | |||| | | |||| |||| Sbjct 29907 CGGT-CTTCGAC-GAGGCGGGTTTCACCGAAGTCGTGGCGGTAGCCACGCGCATGCTGGA 29964 Query 4608 CAACGTGGTCGACCGGGCCCGCTACCCGTTGCCGCAGCAGGAGCAGGAGGCGAGGTCCAA 4667 ||||||| | ||| | | | || ||| |||| ||| | ||||||||| ||| Sbjct 29965 CAACGTGCTGGACGTGACGCCCTGGCCGCTGCCCGCGCAAGCCCAGGAGGCGTCCAACAA 30024 Query 4668 ACGCCGGATGGGCCTGGGTGTGACCGCCCT-GGCGA-ACGCGGGCGAGGCCCTGGGCCAC 4725 ||||| |||||||||| | || | || ||||| | | || | | ||| || Sbjct 30025 GCGCCGCGTGGGCCTGGGGTTCACGGGGCTGGGCGATGCCCTGGTCATG--CTGAACCTG 30082 Query 4726 CCCTACGGCTCGCCCGGCTTC-CTGGACTTCACCCGCCGCGT--GCTGACGATGGTGCGC 4782 | ||| | | || | ||| | | ||| | || ||||| | || || | | ||||| Sbjct 30083 CGCTATGACACG-CAGGCGGCGCGCGACATGGCCAGCCGCATCAGC-GA-GGTCATGCGC 30139 Query 4783 GACGAGTCCTACCGCGCGTC---GGCCCTGTTGGCCCATGAGAAGGGCTCCTTCCCGCTC 4839 |||| ||| ||||| | |||| |||| ||| ||| ||||||||| Sbjct 30140 GACGCCAGCTATGCGGCGTCCAGCGACCTGGCGGCC---GAGCGCGGCAGCTTCCCGCTG 30196 Query 4840 TTCGAGGCCGAGCAGTACCT----GGAGTCCGCCTTCGTGAAGACCCTGCCCGAGGACGT 4895 ||| | ||||| | ||||| || | | | ||| | | | |||||| ||| | Sbjct 30197 TTCAATGCCGATCTCTACCTCTCCGGCGGCAG-CTTTGCGTCGCGCCTGCCGCAGGGGCT 30255 Query 4896 CCGCGAGATGATCGCCGAGCTGGGCATCCGCAACTCCCACCTGACCTCCATCGCGCCGAC 4955 || | |||| | | |||| | |||||||| |||||| |||||||||||||| Sbjct 30256 GAAGGACAAGATCCGTGGCCAGGGCCTGCGCAACTCGCACCTGCTGTCCATCGCGCCGAC 30315 Query 4956 CGGCACCATCAGCCTG---TGCGCCGACAACGTGAGCTCCGGCCTGGAGCCCGTGTTCTC 5012 |||||||||||||||| | |||||||||| |||| |||| | ||||| | |||||| Sbjct 30316 CGGCACCATCAGCCTGGCCTTTGCCGACAACGCGAGCAACGGCATCGAGCCGGCGTTCTC 30375 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 175991294115340