Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavaria_20fumosa_20[genbank_20GCA_5F001179745.1_202015-07-08] 111,201 sequences; 70,469,476 total letters Query= NC_028950.1 Length=223932 Score E Sequences producing significant alignments: (Bits) Value seq80070 123 4e-23 seq111049 95.1 2e-14 >seq80070 Length=5337 Score = 123 bits (136), Expect = 4e-23 Identities = 182/258 (71%), Gaps = 0/258 (0%) Strand=Plus/Minus Query 99223 CTCAGGAACCACATCGCCAGCACGACGAACGATCACCTTATCGCCAATTCGCAGACCTTT 99282 ||| |||| || ||||||||||| || ||||| ||| ||||||| | |||| | || Sbjct 3443 CTCGGGAATGACGTCGCCAGCACGCCGTACGATGACCGTATCGCCCACGCGCACGTCCTT 3384 Query 99283 GCGATGGATTTCATCTTCGTTATGCAGTGTTGCGTTGGAAACCCACACACCGCCCACGAA 99342 ||| |||| || ||||||| ||||| || ||||||| || || || || ||||| Sbjct 3383 GCGCTGGACCTCGCCTTCGTTGTGCAGCGTGGCGTTGGTGACGTTGACGCCACCGACGAA 3324 Query 99343 AACGGGCTTCAGGCGCCCCACGGGGGTGATGGCTCCCGTTCTACCTACTTGAACTTCAAT 99402 |||| | || ||| |||| || |||||||| || || | || || || || || || Sbjct 3323 CACGGATTCAAGCCGCGCCACCGGTGTGATGGCGCCGGTGCGGCCCACCTGCACCTCGAT 3264 Query 99403 CGCCTCTAGCGTCGTTACAGCCTCTTCTGCAGGGAACTTCCACGCGATAGCAAAACGAGG 99462 |||| | |||||| || ||||| || ||||| || ||| | || ||||| || Sbjct 3263 CGCCAGCACCGTCGTCGTCGCTTCTTCAGCGGGGAATTTGTGCGCCAGCGCGAAACGCGG 3204 Query 99463 GGCGCGAGACACATAACC 99480 ||||| || || |||| Sbjct 3203 CGCGCGCGAGACGAAACC 3186 >seq111049 Length=37853 Score = 95.1 bits (104), Expect = 2e-14 Identities = 154/220 (70%), Gaps = 4/220 (2%) Strand=Plus/Minus Query 99224 TCAGGAACCACATCGCCAGCACGACGAACGATCACCTTATCGCCAATTCGCAGACCTTTG 99283 || |||| ||||||||||||||| || | ||| ||||| || || | |||| || ||| Sbjct 17006 TCCGGAATCACATCGCCAGCACGGCGGATGATGACCTTGTCACCCACACGCACGCCCTTG 16947 Query 99284 CGATGGATTTCATCTTCGTTATGCAGTGTTGCGTTGGAAACCCACACACCGCCCACGAAA 99343 || | || || |||| ||||| || |||||||| ||| | ||||||||||| Sbjct 16946 CGGCGCATCTCGAAGACGTTGTGCAGCGTCGCGTTGGAGACCGTCGTGCCGCCCACGAAC 16887 Query 99344 ACGGGCTTCAGGCGCCCCACGGGGGTGATGGCT--CCCGTTCTACCTACTTGAACTTCAA 99401 || || | ||| ||| |||| || || | ||| || || | || || || || |||| Sbjct 16886 ACCGGATCCAGTCGCGCCACCGGTGTCA--GCTTGCCGGTGCGGCCCACCTGCACGTCAA 16829 Query 99402 TCGCCTCTAGCGTCGTTACAGCCTCTTCTGCAGGGAACTT 99441 | ||| |||||||| || ||| | || ||| |||| Sbjct 16828 TGGCCAGCAGCGTCGTCACCTGCTCCTGGGCCGGGTACTT 16789 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 715458519428320