Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavaria_20fumosa_20[genbank_20GCA_5F001179745.1_202015-07-08] 111,201 sequences; 70,469,476 total letters Query= NC_028953.1 Length=110764 Score E Sequences producing significant alignments: (Bits) Value seq108422 125 5e-24 seq108124 98.7 7e-16 >seq108422 Length=3279 Score = 125 bits (138), Expect = 5e-24 Identities = 239/344 (69%), Gaps = 11/344 (3%) Strand=Plus/Minus Query 97188 CGTCGGATACGAAAGCGCCCTGTATCCGGATGG-CACCCCGCGCCCCCACGGGCAGGAAT 97246 ||||| || || ||||| || | ||||||| || ||| || | ||||| | | Sbjct 2175 CGTCGCTGACAAAGGCGCCGTGCACGCGGATGGGCAGACCGGTGCCGGA-GGGCATGTAC 2117 Query 97247 AACCCGTCACCCATTCCCATGAGCTGCTCGGCTCCGCCCTCGTCCAGGATCACCCGGCTA 97306 | | ||| ||||| |||| ||| |||||| || || ||| ||||| ||||| Sbjct 2116 AGCATGTCGCCCATGCCCAGCAGCGCCTCGGCACCCATCTGGTCGAGGATGGTGCGGCTG 2057 Query 97307 TCGGTGAGTGATGCTG---TGGCGAACGAGAGCCTAGACGGCACGTTGGATTTGATAAGG 97363 ||| | || |||| ||| || || || | | ||| | ||||| ||||| ||| Sbjct 2056 TCGATCTTGGA-GCTGACCTGG--AAGGACAGGCGCGTCGGGATGTTGGCCTTGATGAGG 2000 Query 97364 CCTGTGACTACATCCACGGAGGGCCGCTGCGTCGCCAGGACGAGATGAATACCGGCTGCG 97423 || |||| || ||||| || ||||||||||||||||||| || || || ||||| ||| Sbjct 1999 CCGGTGATGACGTCCACCGACGGCCGCTGCGTCGCCAGGATCAGGTGGATGCCGGCCGCG 1940 Query 97424 CGCGCCTTCTGGGCGATGCGGACAATGTTGGCCTCGACTTCTTTCTTGTAGCCGCCCATC 97483 ||||| ||||| || | |||| | || |||||| || |||||| | ||||| Sbjct 1939 CGCGCTTTCTGCGCCAGGCGGGCGATCAGCTCCTCGA--TC-TTCTTGCCAACCACCATC 1883 Query 97484 ATGAGGTCTGCGAGTTCGTCGACCACTACCACGATGTAGGGGAG 97527 || ||||| || || ||||||| || || |||||| |||| || Sbjct 1882 ATCAGGTCGGCCAGCTCGTCGATGACGACGACGATGAAGGGTAG 1839 >seq108124 Length=5758 Score = 98.7 bits (108), Expect = 7e-16 Identities = 112/150 (75%), Gaps = 3/150 (2%) Strand=Plus/Minus Query 97355 TTGATAAGGCCTGTGACTACATCCACGGAGGGCCGCTGCGTCGCCAGGACGAGATGAATA 97414 ||||| ||||| || | || || || || ||||||||||||||||||| || || | Sbjct 147 TTGATCAGGCCGGTAATCACGTCGACCGATGGCCGCTGCGTCGCCAGGATCAGGTGCAGG 88 Query 97415 CCGGCTGCGCGCGCCTTCTGGGCGATGCGGACAATGTTGGCCTCGACTTCTTTCTTGTAG 97474 ||||| |||||||||||||||||||| || | || |||||| | |||||| | Sbjct 87 CCGGCCGCGCGCGCCTTCTGGGCGATACGCGCGATCAACTCCTCGA---CCTTCTTGCCG 31 Query 97475 CCGCCCATCATGAGGTCTGCGAGTTCGTCG 97504 | ||||||| ||||| || || |||||| Sbjct 30 ACCACCATCATCAGGTCGGCCAGCTCGTCG 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 353839803501725