Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavaria_20fumosa_20[genbank_20GCA_5F001179745.1_202015-07-08] 111,201 sequences; 70,469,476 total letters Query= NC_029021.1 Length=60747 Score E Sequences producing significant alignments: (Bits) Value seq84563 111 6e-20 >seq84563 Length=11991 Score = 111 bits (122), Expect = 6e-20 Identities = 230/340 (68%), Gaps = 8/340 (2%) Strand=Plus/Minus Query 614 ATTTTATATCATGGTACTCGTGGCCCTGGAAAGACCGATGCTCAGTTGATGCGTTTTCGT 673 ||| | |||||||| | ||||| ||||||||||||||| | ||| | ||||| ||||| Sbjct 7008 ATTCTTTATCATGGCGCGCGTGGTCCTGGAAAGACCGATACCCAGCTTATGCGCTTTCGA 6949 Query 674 CGTTATGTTGGCATGGGGTACGGTAAACACTGGCGCGGTATCATTTTTGACCGAGAATAC 733 ||| | || || || || |||||| | |||||| || || || || ||||| || || Sbjct 6948 CGTAACGTCGGTATTGGCTACGGTCCATTCTGGCGAGGCATTATCTTCGACCGCGAGTAT 6889 Query 734 AAAAACTTAGATGACTTAGTTGCAAAGTCACAGCGTTGGTTTCCTGAATTTAATGATGGT 793 || | | || ||||| || | ||| | |||| |||||| | || | || ||| Sbjct 6888 AAGCAGCTTGACGACTTGGTGACTAAGGCTAAGCGCTGGTTTATGCAGTTCCAAGACGGT 6829 Query 794 TGTAAATTCTTATCT----TCCAAGTCAGATTATAAATGGGTATGGCCTAGCGGCGAAGA 849 | |||| ||| ||| || || |||||| ||||||| ||||| || Sbjct 6828 GCT---GTCTT-TCTGGAAAGCAATTCTACATACAAATGGCGTTGGCCTACTGGCGAGGA 6773 Query 850 ACTAATGTTCCGTGTTGCTAAAAAGCCTAAGGATTACTGGCTGTACCACGGTCAGGAATT 909 | | | ||||| || | ||||| | || || ||| | |||||||| || | Sbjct 6772 ATTGCTTTTCCGAACGGCAATGAAGCCGGATGACTATTGGAGCTTTCACGGTCACGAGTA 6713 Query 910 TCCATTTATTGGATGGAACGAATTAACTAAATATCCTGAT 949 |||||| || ||||||||||| | || ||||| || ||| Sbjct 6712 TCCATTCATCGGATGGAACGAGCTTACGAAATACCCCGAT 6673 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 194012265742658