Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavaria_20fumosa_20[genbank_20GCA_5F001179745.1_202015-07-08] 111,201 sequences; 70,469,476 total letters Query= NC_029028.1 Length=60754 Score E Sequences producing significant alignments: (Bits) Value seq84563 98.7 4e-16 >seq84563 Length=11991 Score = 98.7 bits (108), Expect = 4e-16 Identities = 241/363 (66%), Gaps = 8/363 (2%) Strand=Plus/Minus Query 614 ATTTTATATCATGGTACTCGTGGCCCTGGAAAGACAGATGCTCAGTTGATGCGTTTTCGT 673 ||| | |||||||| | ||||| ||||||||||| ||| | ||| | ||||| ||||| Sbjct 7008 ATTCTTTATCATGGCGCGCGTGGTCCTGGAAAGACCGATACCCAGCTTATGCGCTTTCGA 6949 Query 674 CGTTATGTTGGCATGGGGTATGGTAAACACTGGCGCGGTATCATTTTTGACCGAGAATAC 733 ||| | || || || || || ||| | |||||| || || || || ||||| || || Sbjct 6948 CGTAACGTCGGTATTGGCTACGGTCCATTCTGGCGAGGCATTATCTTCGACCGCGAGTAT 6889 Query 734 AAAAACTTAGATGACTTAGTTGCAAAGTCACAGCGTTGGTTTCCTGAATTTAATGATGGT 793 || | | || ||||| || | ||| | |||| |||||| | || | || ||| Sbjct 6888 AAGCAGCTTGACGACTTGGTGACTAAGGCTAAGCGCTGGTTTATGCAGTTCCAAGACGGT 6829 Query 794 TGTAAATTCTTATCT----TCCAAGTCAGATTATAAATGGGTATGGCCTAGCGGCGAAGA 849 | |||| ||| ||| || || |||||| ||||||| ||||| || Sbjct 6828 GCT---GTCTT-TCTGGAAAGCAATTCTACATACAAATGGCGTTGGCCTACTGGCGAGGA 6773 Query 850 ACTAATGTTCCGTGTTGCTAAAAAGCCTAAGGATTACTGGCTGTACCACGGTCAGGAATT 909 | | | ||||| || | ||||| | || || ||| | |||||||| || | Sbjct 6772 ATTGCTTTTCCGAACGGCAATGAAGCCGGATGACTATTGGAGCTTTCACGGTCACGAGTA 6713 Query 910 CCCATTTATTGGGTGGAACGAATTAACTAAATATCCGGATAGTGGACTTTACGAAGCAAT 969 ||||| || || |||||||| | || ||||| || ||| | | ||||||| ||| Sbjct 6712 TCCATTCATCGGATGGAACGAGCTTACGAAATACCCCGATGGACGTGTTTACGAGAAAAT 6653 Query 970 GAA 972 ||| Sbjct 6652 GAA 6650 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 194034636163192