Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavaria_20fumosa_20[genbank_20GCA_5F001179745.1_202015-07-08] 111,201 sequences; 70,469,476 total letters Query= NC_029046.1 Length=50827 Score E Sequences producing significant alignments: (Bits) Value seq63967 105 2e-18 seq77470 102 3e-17 >seq63967 Length=1002 Score = 105 bits (116), Expect = 2e-18 Identities = 172/248 (69%), Gaps = 0/248 (0%) Strand=Plus/Minus Query 4949 TCGTTGAGGAAGGCGACAACCTCCACTTCGAGCCCGGCGATCATCGCATCGTCGCGGTGG 5008 ||||| |||||| || || || |||||||| || |||||| | |||||||| | Sbjct 346 TCGTTCAGGAAGTCGGTGACATCGGCTTCGAGCGAAGCAATCATCTCGTCGTCGCGCGGA 287 Query 5009 ACGCGCTGGCAGAAGAACCGCATGGATTCGGGCAGGCGAGGGTCATAGGAAACGAAGTCG 5068 || |||| | ||| | ||| | | |||| || || || | ||||| |||||| Sbjct 286 ACCCGCTTGATGAACGTGCTCATCGTCGCCGGCATCCGGGGATCGAACGAAACAAAGTCG 227 Query 5069 CACCATCCCCGACCGGTGCACGCCATCTGCCATTGCATCTGGGTGATGTACTTCGACGCC 5128 ||||| | || || ||||| ||||||||||| |||||||| |||||||| || || Sbjct 226 CACCAGGCGCGGCCAGTGCAGGCCATCTGCCACTGCATCTGCGTGATGTATTTTCCGGCT 167 Query 5129 ACCTCCTTGTTGAGGAGGGTTTCGATGTGCGTTGCCGTGTTCGGGCACTTGATCTCGACG 5188 || | || || ||||||||||| | || || ||| || || |||||||| Sbjct 166 ACGGTGGCCGTCAGTAGCGTTTCGATGTGGCTGGCGGTTAGCGGACATTTAATCTCGACA 107 Query 5189 AGGCCGTC 5196 || ||||| Sbjct 106 AGCCCGTC 99 >seq77470 Length=284 Score = 102 bits (112), Expect = 3e-17 Identities = 112/149 (75%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 36824 GGTGACCGGGCCTACGGCGCATATCAGGTCATGGGCAACAACATCGGGCCGTGGTCGCAA 36883 || || || |||| ||||| |||||||||||||||||||| ||| ||||| || || Sbjct 245 GGCGATCGTGCCTTTGGCGCGTATCAGGTCATGGGCAACAATATCCCCTCGTGGACGAAA 186 Query 36884 GCTGCGCTCGGCCGCACGATGTCGGCTTCGGAGTTCCTGACCGATAAGGGCGCGCAGGAT 36943 |||||||||| || || || | ||| | | || || || ||||||||||| Sbjct 185 TCTGCGCTCGGGACATCGTTGACGCCGTCGCAATATCTCGCCAGCCAGAGCGCGCAGGAT 126 Query 36944 GCGATCTTCGCGCACCGGTTCGGCGGCTA 36972 || |||||||||||| |||||||||||| Sbjct 125 GCCGTCTTCGCGCACCAGTTCGGCGGCTA 97 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 162310184071618