Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavaria_20fumosa_20[genbank_20GCA_5F001179745.1_202015-07-08] 111,201 sequences; 70,469,476 total letters Query= NC_029066.1 Length=48666 Score E Sequences producing significant alignments: (Bits) Value seq51864 95.1 4e-15 seq108012 86.0 2e-12 >seq51864 Length=1649 Score = 95.1 bits (104), Expect = 4e-15 Identities = 186/267 (70%), Gaps = 15/267 (6%) Strand=Plus/Plus Query 23918 AACCTGTATTTCATCACCGACAAGGCAGGCAA-GAAGACTCGCTTCCGC----ATGACAG 23972 ||||| || | ||||| |||||||| ||||| | | | || |||||| ||||||| Sbjct 1259 AACCTCTACATGATCACGGACAAGGCGGGCAAAGCCGTCCCG-TTCCGCCCGAATGACAG 1317 Query 23973 CGGAGCAGTTGGAGTATTTCGAAGGCCTGCACACTCGGAACATCATCCTGAAGGCACGCC 24032 | ||||||| || |||| | | ||| | | ||||||||||||||||| || | Sbjct 1318 C----CAGTTGGCGTTCCTCGATGATGTTCACGCGCTCAACATCATCCTGAAGGCTCGGC 1373 Query 24033 AGCTCGGCTTTACGACTGAGCAG-TGCATCATTCAACTGGACGCGGCGCTGTTCGAGTCG 24091 ||||||| || ||||| | | | ||| | || | || ||||| | ||| | || Sbjct 1374 AGCTCGGGTTCACGAC-GCTCTGCTGCCTGATCTATCTCGACGCCTGCATTTTCACGCCG 1432 Query 24092 GCCA--AGTGCGCGC-TGATTGCTCACACCCTGAATGATGCCAAGCGCCTGTTCCGGGAG 24148 || || ||| || | ||||| |||| || | ||| | ||| | | |||||||| Sbjct 1433 AACACCAGGGCGGGCGTCATTGCCCACAAGTTGGACGATTCAAAGGTCATCTTCCGGGAC 1492 Query 24149 AAGATCAAGTTCGCGTACGACAATCTG 24175 ||||||||||| |||| ||||||||| Sbjct 1493 AAGATCAAGTTTCCGTATGACAATCTG 1519 >seq108012 Length=18191 Score = 86.0 bits (94), Expect = 2e-12 Identities = 221/332 (67%), Gaps = 6/332 (2%) Strand=Plus/Minus Query 33400 AACGCCAACCCGGCCGTTGCTTCAGCAGTCGGTCATGGCCTCGCCAATGGCGATATCGTC 33459 ||||||||||| | |||||| | || || || ||| || ||| ||||| |||| Sbjct 6930 AACGCCAACCCCGGCGTTGCCACGGCCACCGCGCACGGCTTCAGCAACGGCGACTTCGTG 6871 Query 33460 --GAAGTCACCTCAGGCTGGTCGCGCTTGAATAGCCGCGTCGCTCGGGTCGCCAACGTGG 33517 | || | ||| |||||||| || | |||| |||| || |||||| | Sbjct 6870 CTGCAG--AACTCCGGCTGGTCCAAGCTGGACGGCCGGGTCGTCCGCGTCGCCGCATCCG 6813 Query 33518 CCGTCGACACCTTCGAGCTGGAAGGCATCAACACCACCTCGACCAACCTTTACCCGGCTG 33577 || | || | |||||| |||||| |||| ||||| || | ||||| || | Sbjct 6812 CCACCAACCAGTATTCGCTGGACGGCATCGACACGACCTCCACGGCGCGCTACCCCGCCG 6753 Query 33578 GCGGCGGCGCAGGATCGGTGCGCAAGG-TCAGCACCTGGCAGCAAATCACGCAGGTTCTG 33636 ||||||||| || || | || |||||||||||||||| ||| ||||| | ||| Sbjct 6752 GCGGCGGCGTCGGCCAGGC-CACACCCATCAGCACCTGGCAGCAGATCGCGCAGATCCTG 6694 Query 33637 GAGTTCACCACGTCGGGTGGCGAGCAGCAGTTCGTTACCTACTCGTTCCTGGAAGAGGAT 33696 ||| || || ||||| |||||||||| ||||||| |||||||| |||| Sbjct 6693 AGCTTCGAAACCAGCGGCGGCGACCAGCAGTTCGCCTCCTACTCTTTCCTGGAGCAGGAC 6634 Query 33697 GTAGAGCACCAGATCCCGACCGTCAAGAGCGC 33728 | || |||| | || ||| ||| ||||| Sbjct 6633 TTCGAATCCCAGCTGCCCACCATCACCAGCGC 6602 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 155404115675336