Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavaria_20fumosa_20[genbank_20GCA_5F001179745.1_202015-07-08] 111,201 sequences; 70,469,476 total letters Query= NC_029098.1 Length=133531 Score E Sequences producing significant alignments: (Bits) Value seq15770 114 1e-20 >seq15770 Length=411 Score = 114 bits (126), Expect = 1e-20 Identities = 165/233 (71%), Gaps = 0/233 (0%) Strand=Plus/Minus Query 20940 TTCGACTTCGGAACTAATCCATGCTCAGAGATTATCCTTCGACCTAATCAGTTCTGTAAC 20999 || || || |||||||| || ||||| || || || || |||| |||| || |||||| Sbjct 381 TTTGATTTTGGAACTAACCCTTGCTCTGAAATCATACTCAGACCATATCAATTTTGTAAC 322 Query 21000 CTGACTGAGGTTGTTGTCCGACCAGACGACACCACAGAAACTCTGATGCGAAAGGTAAAG 21059 || | || ||||| |||||| | | ||||| ||| |||| | ||||| | Sbjct 321 CTCTCAGAAGTTGTGGTCCGATCTGGAGACACTGTTGAATCTCTACTTGATAAGGTCGAA 262 Query 21060 GCCGCCACAATTCTCGGAACGTGGCAGTCAACACTTACGAACTTCAAGTATCTTCGTAAG 21119 || ||||| || ||||| | || |||||| | || ||||| || || ||||| Sbjct 261 ATTGCAACAATCCTTGGAACTTTTCAATCAACATTAACTAACTTTCCATACCTCCGTAAA 202 Query 21120 ATTTGGAAGAAGAACACCGAGGAAGAAAGACTGCTTGGCGTTTCTCTTACCGG 21172 || ||| | ||||| || || ||||||||||| |||||||| ||||| || || Sbjct 201 ATCTGGCAAAAGAATACAGAAGAAGAAAGACTCCTTGGCGTATCTCTGACAGG 149 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 426595466688212