Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavaria_20fumosa_20[genbank_20GCA_5F001179745.1_202015-07-08] 111,201 sequences; 70,469,476 total letters Query= NC_029132.1 Length=140122 Score E Sequences producing significant alignments: (Bits) Value seq109030 118 9e-22 seq13662 82.4 7e-11 >seq109030 Length=5052 Score = 118 bits (130), Expect = 9e-22 Identities = 190/271 (70%), Gaps = 4/271 (1%) Strand=Plus/Plus Query 6854 AGCTGGTCCGCTCCCTGTCCCGAATAGTCCGCTTCGCTCCCCCGATACTCCGCCCCAAAG 6913 || ||||| | ||||| || | ||||| || |||| || |||| || |||||| Sbjct 2415 AGTTGGTCAACGCCCTGCCCGGCGTAGTCAGCGTCGCAGTCCGTGTACTGTGCGCCAAAG 2474 Query 6914 TGTCTCCACTGGAACCCGTAGACCGGGCCCAAGTCGCCCTCCTCCCGAGATGGG--AACC 6971 || ||||||||||||||||| | |||||| | ||| || || | | |||| | | || Sbjct 2475 TGCCTCCACTGGAACCCGTATATCGGGCCGAGGTCCCCTTC--GCGGCGATGCGCCAGCC 2532 Query 6972 CCCGCTTGTCCAGAAAGTCTCGAGACCCGTGAGCGTCCCAGATCTTCACCCCCCGGGACG 7031 | ||| || || ||| | |||||||| | | || |||||| ||| || | || Sbjct 2533 CTCGCGCATCGAGGAAGGCGCGAGACCCATTCGGGTTCCAGATGCGCACACCTTGCCGCG 2592 Query 7032 AGAGCTCCTTGGTGTTCGTGGCCCCCCTCACGAACCACAGCAGCTCCTCGACCACGCCCT 7091 ||||| | || ||| ||||| | ||||||||||||||||||| ||| |||||| Sbjct 2593 AGAGCAGCGCCCCGTCCGTCGCCCCGCGCACGAACCACAGCAGCTCCGCGATCACGCCAC 2652 Query 7092 TCCAGTACACACGTTTCGTCGTCAGCAGCGG 7122 | | | || || || ||||||||||| || Sbjct 2653 GCAGGAAGACGCGCTTTGTCGTCAGCAGTGG 2683 Score = 118 bits (130), Expect = 9e-22 Identities = 190/271 (70%), Gaps = 4/271 (1%) Strand=Plus/Minus Query 34223 CCGCTGCTGACGACGAAACGTGTGTACTGGAAGGGCGTGGTCGAGGAGCTGCTGTGGTTC 34282 || ||||||||||| || || || | | | |||||| ||| |||||||||||||||| Sbjct 2683 CCACTGCTGACGACAAAGCGCGTCTTCCTGCGTGGCGTGATCGCGGAGCTGCTGTGGTTC 2624 Query 34283 GTGAGGGGGGCCACGAACACCAAGGAGCTCTCGTCCCGGGGGGTGAAGATCTGGGACGCT 34342 ||| | ||||| ||| || | ||||||| | || ||| |||||| || | Sbjct 2623 GTGCGCGGGGCGACGGACGGGGCGCTGCTCTCGCGGCAAGGTGTGCGCATCTGGAACCCG 2564 Query 34343 CACGGGTCTCGAGACTTTCTGGACAAGCGGGGGTT--CCCATCTCGGGAGGAGGGCGACT 34400 | |||||||| | ||| || || ||| ||| | | |||| | | || || ||| Sbjct 2563 AATGGGTCTCGCGCCTTCCTCGATGCGCGAGGGCTGGCGCATCGCCGC--GAAGGGGACC 2506 Query 34401 TGGGCCCGGTCTACGGGTTCCAGTGGAGACACTTTGGGGCGGAGTATCGGGGGAGCGAAG 34460 | |||||| | ||||||||||||||||| |||||||| || |||| || |||| | Sbjct 2505 TCGGCCCGATATACGGGTTCCAGTGGAGGCACTTTGGCGCACAGTACACGGACTGCGACG 2446 Query 34461 CGGACTATTCGGGACAGGGAGCGGACCAGCT 34491 | ||||| | || ||||| | ||||| || Sbjct 2445 CTGACTACGCCGGGCAGGGCGTTGACCAACT 2415 >seq13662 Length=10689 Score = 82.4 bits (90), Expect = 7e-11 Identities = 120/170 (71%), Gaps = 0/170 (0%) Strand=Plus/Plus Query 6546 GCTCGATGTGGTTCAGGTAGATATGCGCATCCCCCAACGTATGCACCAGCTCCCCAGGAA 6605 |||||| ||||||| |||| ||| | ||| || | || |||||| | ||| || || Sbjct 10520 GCTCGAAGTGGTTCGAATAGAGATGGGTATCGCCGAGCGAATGCACGAACTCGCCCGGCT 10579 Query 6606 CCAACCCCACGACATGAGCGATCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAACG 6665 || |||| | || || ||||| ||| ||||| || || || || |||||||| | Sbjct 10580 TCAGCCCCGTCGCCTGCGCCATCATCATCGTCAGCAGCGCATAGCTGGCGATGTTGAAGG 10639 Query 6666 GCACCCCTAACCCCATGTCTCCCGATCGTTGATAGAGCTGGCAGGACAGC 6715 | || || | || || |||| || |||||||||||||| |||||| Sbjct 10640 GAACGCCCAGGAACACATCCGCCGAGCGCTGATAGAGCTGGCACGACAGC 10689 Score = 82.4 bits (90), Expect = 7e-11 Identities = 120/170 (71%), Gaps = 0/170 (0%) Strand=Plus/Minus Query 34630 GCTGTCCTGCCAGCTCTATCAACGATCGGGAGACATGGGGTTAGGGGTGCCGTTCAACAT 34689 |||||| |||||||||||||| || |||| || || | || || || |||||||| Sbjct 10689 GCTGTCGTGCCAGCTCTATCAGCGCTCGGCGGATGTGTTCCTGGGCGTTCCCTTCAACAT 10630 Query 34690 TGCTAGTTACGCTCTGCTCACGTACATGATCGCTCATGTCGTGGGGTTGGTTCCTGGGGA 34749 || || || || ||||| ||| ||||| || || | |||| || || || || Sbjct 10629 CGCCAGCTATGCGCTGCTGACGATGATGATGGCGCAGGCGACGGGGCTGAAGCCGGGCGA 10570 Query 34750 GCTGGTGCATACGTTGGGGGATGCGCATATCTACCTGAACCACATCGAGC 34799 | | |||||| || | || ||| | ||| |||| ||||||| |||||| Sbjct 10569 GTTCGTGCATTCGCTCGGCGATACCCATCTCTATTCGAACCACTTCGAGC 10520 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 447639309660720