Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavaria_20fumosa_20[genbank_20GCA_5F001179745.1_202015-07-08] 111,201 sequences; 70,469,476 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq106734 168 2e-36 seq110395 159 8e-34 seq70823 143 6e-29 seq109771 111 4e-19 seq107974 111 4e-19 >seq106734 Length=403 Score = 168 bits (186), Expect = 2e-36 Identities = 161/206 (78%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 210909 AGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGC 210968 || ||||| |||||||| || ||||| ||||| |||| || || | || || |||| | Sbjct 236 AGATGAAGGGTGGACTCCTTCTGGATATTATAGTCCGAGAGCGTGCGCCCGTCCTCCAAC 177 Query 210969 TGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATC 211028 |||||||| |||||||| || ||||||||||| || || | |||||||||||||| ||| Sbjct 176 TGCTTGCCGGCGAAGATCAGACGTTGTTGGTCGGGGGGGATACCTTCCTTGTCCTGAATC 117 Query 211029 TTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCC 211088 || || ||||| ||||| ||||| || || ||||| || ||||| ||||| ||| Sbjct 116 TTGGCCTTGACGTTGTCGATAGTGTCCGAAGACTCTACCTCCAGCGTGATTGTCTTGCCC 57 Query 211089 GTGAGAGTCTTTACAAACACCTGCAT 211114 ||||| ||||| ||||| | |||||| Sbjct 56 GTGAGCGTCTTCACAAAGATCTGCAT 31 >seq110395 Length=10286 Score = 159 bits (176), Expect = 8e-34 Identities = 168/221 (76%), Gaps = 0/221 (0%) Strand=Plus/Minus Query 210894 CGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTC 210953 ||||| | ||||| | || || |||||||| || |||||||| || || | ||||| Sbjct 9976 CGAAGACGGAGGACCAAATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTA 9917 Query 210954 CTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCT 211013 | || || || ||||||||||| ||||||||||| || ||||| || || || | ||| Sbjct 9916 CGCCCGTCCTCGAGCTGCTTGCCGGCGAAGATAAGACGCTGTTGATCGGGGGGGATGCCT 9857 Query 211014 TCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGA 211073 ||||| |||||||| || || ||||| |||||||| || || ||| |||||||| Sbjct 9856 TCCTTATCCTGGATTTTGGCCTTAACGTTGTCGATGGTATCGGACGATTCGACCTCGAGG 9797 Query 211074 GTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 ||||||||||| || || || ||||| || || | |||||| Sbjct 9796 GTGATCGTCTTCCCAGTAAGCGTCTTAACGAAGATCTGCAT 9756 Score = 150 bits (166), Expect = 4e-31 Identities = 158/208 (76%), Gaps = 0/208 (0%) Strand=Plus/Minus Query 210907 CAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCA 210966 |||| || || || || || || ||||| || ||||| | || || | || ||||||| Sbjct 10191 CAAGATGGAGGGTCGATTCCTTCTGGATATTGTAATCGGAGAGCGTGCGGCCGTCTTCCA 10132 Query 210967 GCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGA 211026 |||||||||||| || || ||||| || ||||| || || | |||||||||||||||| Sbjct 10131 ACTGCTTGCCTGCAAAAATCAGGCGCTGCTGGTCGGGCGGGATGCCTTCCTTGTCCTGGA 10072 Query 211027 TCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTC 211086 |||| || ||||| ||||||||||| || || |||||||| ||||| ||||| | Sbjct 10071 TCTTAGCCTTGACGTTATCGATGGTGTCGGACGACTCGACCTCGAGGGTGATGGTCTTCC 10012 Query 211087 CCGTGAGAGTCTTTACAAACACCTGCAT 211114 | ||||| ||||| || || | ||||| Sbjct 10011 CAGTGAGCGTCTTGACGAATATTTGCAT 9984 Score = 109 bits (120), Expect = 1e-18 Identities = 92/114 (81%), Gaps = 0/114 (0%) Strand=Plus/Minus Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952 |||||| | ||||| | ||| ||||||||||| || |||||||| || || | ||| || Sbjct 9749 ACGAAGACGGAGGACCAAGTGGAGAGTGGACTCCTTCTGGATGTTGTARTCAGAAAGAGT 9690 Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGG 211006 || ||| || || |||||||| || |||||||| |||||||| ||||| ||||| Sbjct 9689 CCGTCCGTCCTCGAGCTGCTTTCCAGCGAAGATCAGGCGTTGCTGGTCGGGAGG 9636 Score = 107 bits (118), Expect = 4e-18 Identities = 86/104 (83%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 211011 CCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCG 211070 || ||||||||||||||||| || ||||| || ||||| |||||| ||| ||||| Sbjct 9577 CCCTCCTTGTCCTGGATCTTAGCCTTGACGTTGTCAATGGTATCAGAGGATTCGACCTCC 9518 Query 211071 AGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 |||||||| |||||||| |||||||||||||| || | |||||| Sbjct 9517 AGAGTGATGGTCTTTCCGGTGAGAGTCTTTACGAAGATCTGCAT 9474 >seq70823 Length=785 Score = 143 bits (158), Expect = 6e-29 Identities = 159/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| | |||||| || |||||||| || ||||| ||||| | ||| || | ||||| Sbjct 331 AGGACCAAGTGAAGGGTAGACTCTTTCTGAATGTTGTAATCTGAAAGAGTGCAGCCATCC 272 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 | ||||||||||| || ||||| || | || ||||||||||| | |||||||||| | Sbjct 271 TGAAGCTGCTTGCCAGCAAAGATGAGACACTGCTGGTCAGGAGGGATGCCTTCCTTGTTC 212 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 || ||||| |||||| || | ||||| |||| |||||||| | || || ||| Sbjct 211 TGAATCTTGGCTTTCACATTGCCAATGGTATCAGTTGGCTCAACCTCTAATGTAATAGTC 152 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || ||||| ||||| ||||| | ||| || Sbjct 151 TTCCCTGTGAGGGTCTTGACAAATATCTGTAT 120 >seq109771 Length=16137 Score = 111 bits (122), Expect = 4e-19 Identities = 90/109 (83%), Gaps = 0/109 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| ||||| ||||||||||| || |||||||| || || ||| || | |||||| Sbjct 11259 AGGACGAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGCTAAGAGTGCGGCCATCT 11200 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTC 211011 || |||||||| ||||||||||| || || |||||||||||||||| || Sbjct 11199 TCAAGCTGCTTTCCTGCGAAGATGAGTCGCTGTTGGTCAGGAGGAATTC 11151 >seq107974 Length=16430 Score = 111 bits (122), Expect = 4e-19 Identities = 88/106 (83%), Gaps = 0/106 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || |||||||| |||||||||||||||||||||||||| || || || | || ||| Sbjct 9501 AGCACAAGGTGGAGAGTGGACTCTTTTTGGATGTTATAGTCACTCAGAGTTCGACCGTCT 9442 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAA 211008 || ||||||||||| |||||||| ||||||||||| || || |||| Sbjct 9441 TCGAGCTGCTTGCCAGCGAAGATGAGGCGTTGTTGATCGGGGGGAA 9396 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1157500483336365