Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavaria_20fumosa_20[genbank_20GCA_5F001179745.1_202015-07-08] 111,201 sequences; 70,469,476 total letters Query= NC_029996.1 Length=134272 Score E Sequences producing significant alignments: (Bits) Value seq110395 96.9 3e-15 >seq110395 Length=10286 Score = 96.9 bits (106), Expect = 3e-15 Identities = 149/210 (71%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 39076 ACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCA 39135 |||||||| || ||| ||| || || || || || |||| || || || |||| || Sbjct 9964 ACCAAATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTACGCCCGTCCTCG 9905 Query 39136 AGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATG 39195 ||||| ||||| || || ||||||||||| || |||| ||| | || || || ||| | Sbjct 9904 AGCTGCTTGCCGGCGAAGATAAGACGCTGTTGATCGGGGGGGATGCCTTCCTTATCCTGG 9845 Query 39196 ATTTTCTGTTTGAGCGTCG-CCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTT 39254 ||||| | | | ||| | | | |||||| ||| || || || | ||||| | || Sbjct 9844 ATTTT-GGCCTTAACGTTGTCGATGGTATCGGACGATTCGACCTCGAGGGTGATCGTCTT 9786 Query 39255 TCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 || || ||||| ||||| ||||| ||||| Sbjct 9785 CCCAGTAAGCGTCTTAACGAAGATCTGCAT 9756 Score = 84.2 bits (92), Expect = 2e-11 Identities = 133/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 39094 TCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAAT 39153 || || || ||||| ||||||| || || || |||| || | ||| ||||| ||||| Sbjct 10174 TCCTTCTGGATATTGTAATCGGAGAGCGTGCGGCCGTCTTCCAACTGCTTGCCTGCAAAA 10115 Query 39154 ATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGTC 39213 || || ||||||||||||| || | || || |||||| ||| || |||| | Sbjct 10114 ATCAGGCGCTGCTGGTCGGGCGGGATGCCTTCCTTGTCCTGGATCTTAGCCTTGACGTTA 10055 Query 39214 GCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAACA 39273 | | || ||| |||||| || || | ||||| | || || || ||||| || || Sbjct 10054 TCGATGGTGTCGGACGACTCGACCTCGAGGGTGATGGTCTTCCCAGTGAGCGTCTTGACG 9995 Query 39274 AAGATTTGCAT 39284 || |||||||| Sbjct 9994 AATATTTGCAT 9984 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 428963453090513