Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavaria_20fumosa_20[genbank_20GCA_5F001179745.1_202015-07-08] 111,201 sequences; 70,469,476 total letters Query= NC_030931.1 Length=41871 Score E Sequences producing significant alignments: (Bits) Value seq109371 122 2e-23 seq50839 104 6e-18 seq41057 84.2 6e-12 >seq109371 Length=32687 Score = 122 bits (134), Expect = 2e-23 Identities = 180/247 (73%), Gaps = 10/247 (4%) Strand=Plus/Plus Query 2133 CCCCAGCATGGAACCAGAATGTCGGCGTCTGCGACGATGGCGCGGAAGTGTTC--CGTGC 2190 |||||||| || || || |||||||| || || |||| || || |||||| || | Sbjct 1571 CCCCAGCAGGGGACGAGGATGTCGGCCTCGCAGATGATGTCGGTGATGTGTTCGCCGATC 1630 Query 2191 TCAGCGGGCCAAACGGATCATC--CTGCCTGCGAAGCTCTTTCACGTCAGTGGCGCGGTA 2248 || || || |||||||| || || || || | | || |||||| |||||||| || Sbjct 1631 TCGTCG--CCGAACGGATCGTCTACT-CCGGCCAGG-TCGCGCACGTCGGTGGCGCGATA 1686 Query 2249 GCAGAACACATTGCCGACGATGAACCGGTGACCTCCGTTGCGCAGAGT-GAAGCCGCGCC 2307 | |||||| |||||||||||||| || || || || | || | ||||||| || Sbjct 1687 GGCGAACACGTTGCCGACGATGAAGCGCTGGCCGCCCCAG-GCTTTGACGAAGCCGGTCC 1745 Query 2308 ACTTGCGTACCGTTGCATCGTCGATGCTGGCGTCCGCGGTGCTGGGGTTGACCCCAAAAT 2367 ||||||| ||||| || ||||| | ||||||| || |||||||||||||| || || Sbjct 1746 ACTTGCGCACCGTCGCGTCGTCTTCGGTGGCGTCGGCTGTGCTGGGGTTGACGCCGAAGA 1805 Query 2368 ATGCGTA 2374 | ||||| Sbjct 1806 AGGCGTA 1812 >seq50839 Length=349 Score = 104 bits (114), Expect = 6e-18 Identities = 209/303 (69%), Gaps = 8/303 (3%) Strand=Plus/Minus Query 25710 TTCGACCCGATCGGGTACGACTGGTGGACTGGCGAGGGCGTCACGGCCAAGCGCATCAGC 25769 |||||| ||| || | |||| ||||| || || || || ||||||||| || | Sbjct 299 TTCGACGTGATTGGCGAAGACTATTGGACCGGTGAAGGTGTGACGGCCAAGAAGATTGCC 240 Query 25770 GCCGCGTTGCGAGCCATGAAGGATGCCGACGTGGTGGTGAACATCAACAGCCCTGGCGGA 25829 ||| |||||| | || | | || || || ||| |||||||| |||||||| Sbjct 239 GCCAAGTTGCGTGAGCTGGACGGCGCTGATGTTTCGGTTTACATCAACTCGCCTGGCGGT 180 Query 25830 GATGTCTTCGAGGGGCTGGCGATCTACAACCTGCTGCGCGAGCACAAGGGCAAGGTCACC 25889 || | ||||| || ||||| || |||||| ||||||||||| |||| ||| | || ||| Sbjct 179 GACATGTTCGAAGGCCTGGCCATTTACAACTTGCTGCGCGAGTACAAAGGCGACGTAACC 120 Query 25890 GTACGCGTGC--TCGGCCTGGCAGCTTCCGCAGCGTCGTTCATTGCCATGGCGGCCGAT- 25946 || || | ||| |||| || || || ||||| | || |||||| | ||| Sbjct 119 --ACCAAGGCTATTGGCATGGCTGCATCTGCCGCGTCTGTGATCTACATGGCTGGTGATA 62 Query 25947 GAGGTGAAGATCGCCCGCGCCGGC-TTCCTGATGATCCACAACGCCTGGACGATCGCCGC 26005 | || |||| | || | || || |||||||||||||||||||||||| | || || Sbjct 61 CACGT-CAGATTG-GTTCGTCTGCGTTTCTGATGATCCACAACGCCTGGACGCTGGCAGC 4 Query 26006 GGG 26008 || Sbjct 3 TGG 1 >seq41057 Length=259 Score = 84.2 bits (92), Expect = 6e-12 Identities = 115/161 (71%), Gaps = 0/161 (0%) Strand=Plus/Plus Query 24928 GATCACGATGAACCCCGAAGCTGCGCAGATGCTGGAGTCGCGGTCGTTCAACGTCGAGGA 24987 |||||| | || || |||| ||||||||||| || ||||| | ||| |||||||| Sbjct 88 GATCACCTTCAATCCTGAAGACGCGCAGATGCTCGAATCGCGCGCCTTCTCGGTCGAGGA 147 Query 24988 GATGTGTCGTTGGTTCCGCGTCCCGCCGTTCATGGTGGGGCACATGGACAAGCAGTCCAG 25047 || ||||| | ||| |||| ||||| |||||||| || |||| || ||| | | || Sbjct 148 AATCTGTCGCTTCTTCGGCGTACCGCCCTTCATGGTCGGCCACACAGAGAAGACGACGAG 207 Query 25048 CTGGGCCAGCTCTGTGGAGGCGCAGAACCTCCACTTCCTGA 25088 ||||| || |||| ||||| |||| ||||| || Sbjct 208 CTGGGGCACGGGGCTGGAACAGCAGATCCTCGCCTTCCAGA 248 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 133688828885546