Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavaria_20fumosa_20[genbank_20GCA_5F001179745.1_202015-07-08] 111,201 sequences; 70,469,476 total letters Query= NC_031007.1 Length=223935 Score E Sequences producing significant alignments: (Bits) Value seq71830 143 4e-29 seq107811 125 1e-23 seq23854 100 4e-16 seq105722 98.7 1e-15 seq26113 91.5 2e-13 seq15205 89.7 7e-13 seq73273 86.0 9e-12 seq67505 86.0 9e-12 >seq71830 Length=566 Score = 143 bits (158), Expect = 4e-29 Identities = 187/256 (73%), Gaps = 2/256 (1%) Strand=Plus/Plus Query 99197 AAGAAAGACCGTACGGGAACCGGTACCCTGTCTATTTTCGGGCACCAGATGCGTTTCAAT 99256 ||| | |||||||| || ||||| ||| | | | || || |||| |||||||| ||| Sbjct 216 AAGCACGACCGTACCGGCACCGGCACCATTAGTGTGTTTGGCTACCAAATGCGTTTTAAT 275 Query 99257 CTGCAAGAAGGCTTTCCGCTGGTAACGACTAAGC-GCTGTCACATGCGTTCGATTATTCA 99315 | |||| || || |||||||| ||||| || |||| ||| || ||||| || || Sbjct 276 TTAAAAGACGGTTTCCCGCTGGTGACGACCAAAAAGCTG-CACTTGAAATCGATCATCCA 334 Query 99316 CGAACTGCTGTGGTTCCTGAAAGGCGATACCAATGTCAAATATTTAAATGATAATGGTGT 99375 ||| || | ||||| ||| || ||||||||| ||||||| |||| ||||| || || Sbjct 335 CGAGTTGATCTGGTTTTTGAGCGGTGATACCAATATCAAATACCTAAAAGATAACGGCGT 394 Query 99376 AACTATTTGGGACGAATGGAAGAACAAAGATGGCGACCTCGGACCGGTATACGGTAAACA 99435 || ||||||||||| ||| | |||||| ||||||| ||||| || || | || Sbjct 395 AAAAATTTGGGACGAGTGGGCCGATGCCGATGGCAACCTCGGGCCGGTGTATGGGTACCA 454 Query 99436 GTGGCGGTCTTGGCCT 99451 |||||||| |||||| Sbjct 455 ATGGCGGTCGTGGCCT 470 >seq107811 Length=6275 Score = 125 bits (138), Expect = 1e-23 Identities = 219/314 (70%), Gaps = 6/314 (2%) Strand=Plus/Minus Query 99857 TCGTGTCAGCTTTATCAACGCAGCGCCGATGTGTTCTTAGGGGTGCCGTTTAATATTGCG 99916 ||||| ||||| || || ||||||||||| | ||| | || |||||||| ||||| || Sbjct 4406 TCGTGCCAGCTGTACCAGCGCAGCGCCGACATCTTCCTCGGCGTGCCGTTCAATATCGCC 4347 Query 99917 TCATACGCTTTGTTGATCCACATGTTTGCACAGCAGGCTAACATGACCGTGGGTGATTTC 99976 || ||||| || ||| |||||| | || |||||||| | |||||| || ||| Sbjct 4346 TCGTACGCGCTGCTGACGCACATGATGGCGCAGCAGGCAGGTCTCGACGTGGGCGACTTC 4287 Query 99977 GTCTGGTCTGGTGGTGACGTACATCTGTACAATAACCATCTGGAACAAACC--CGTACCC 100034 |||||| | || |||||| || || || ||||| |||| || | || | | Sbjct 4286 GTCTGGACCGGCGGTGACTGCCACCTCTATTCGAACCACATGGAGCAGGTCGACGAA--C 4229 Query 100035 AGTTAGGTCGTGCCCCGCGTCCGTTACCTAAGCTGATTATCAAACGTAAGCCAGACTCCA 100094 || | | || ||||||| ||| | || ||||| | ||||| || ||||| ||| | Sbjct 4228 AGCTCGCGCGCGCCCCGCTGCCGCTGCCCAAGCTCGTCATCAAGCGCAAGCCGGACACGC 4169 Query 100095 TCTTCGAATATAAGTTTGAAGACTTCGAACTTGAAGGCTACGACCCGCATCCTGCA-ATC 100153 | ||||| || | || || |||||||| | | ||||||| ||||| | ||| ||| Sbjct 4168 TGTTCGACTACACCTTCGACGACTTCGAGATCGTCGGCTACGCGTCGCATGC-GCACATC 4110 Query 100154 AAAGCACCGGTCGC 100167 || || ||||| || Sbjct 4109 AAGGCGCCGGTGGC 4096 Score = 120 bits (132), Expect = 4e-22 Identities = 172/240 (72%), Gaps = 2/240 (1%) Strand=Plus/Minus Query 99203 GACCGTACGGGAACCGGTACCCTGTCTATTTTCGGGCACCAGATGCGTTTCAATCTGCAA 99262 ||||| ||||| ||||| || | || | ||||| ||||||||||| |||||| |||| Sbjct 4826 GACCGCACGGGCACCGGCACGGTCTCCGTGTTCGGCCACCAGATGCGCTTCAATTTGCAG 4767 Query 99263 GAAGGCTTTCCGCTGGTAACGACTAAG-CGCTGTCACATGCGTTCGATTATTCACGAACT 99321 || || |||||||| || ||||| ||| |||| || || ||||| || || ||||| Sbjct 4766 GATGGTTTTCCGCTCGTGACGACCAAGAAGCTG-CATCTGAAGTCGATCATCCATGAACT 4708 Query 99322 GCTGTGGTTCCTGAAAGGCGATACCAATGTCAAATATTTAAATGATAATGGTGTAACTAT 99381 | | ||||||||| || ||||| || ||| | || || || || || | || Sbjct 4707 GATCTGGTTCCTGGCGGGGTCCACCAACATCGGCTATCTGAAGGAAAACGGCGTCAAGAT 4648 Query 99382 TTGGGACGAATGGAAGAACAAAGATGGCGACCTCGGACCGGTATACGGTAAACAGTGGCG 99441 |||||||| ||| | || | ||||||||||| ||| | ||||| | |||||||| Sbjct 4647 CTGGGACGAGTGGGCCGATGAAAACGGCGACCTCGGTCCGATCTACGGCTACCAGTGGCG 4588 >seq23854 Length=6065 Score = 100 bits (110), Expect = 4e-16 Identities = 181/262 (69%), Gaps = 2/262 (1%) Strand=Plus/Minus Query 99188 GGCGTGCCGAAGAAAGACCGTACGGGAACCGGTACCCTGTCTATTTTCGGGCACCAGATG 99247 |||| | |||| | |||||||| || || || || || | |||||||| |||||| Sbjct 461 GGCGCGGTGAAGCAGGACCGTACCGGCACGGGCACGAAATCGGTGTTCGGGCATCAGATG 402 Query 99248 CGTTTCAATCTGCAAGAAGGCTTTCCGCTGGTAACGACTAAGC-GCTGTCACATGCGTTC 99306 || || | || || || |||||| || | ||||| ||| |||| || || || Sbjct 401 CGGTTTGACCTCGCCGACGGATTTCCGTTGCTGACGACGAAGAAGCTG-CATCTGAAGTC 343 Query 99307 GATTATTCACGAACTGCTGTGGTTCCTGAAAGGCGATACCAATGTCAAATATTTAAATGA 99366 ||| || ||| ||||||||||||||| ||||| || |||||| | | | || Sbjct 342 GATCATCGTCGAGCTGCTGTGGTTCCTGCGCGGCGAGACGAATGTCGCCTGGCTGCAGGA 283 Query 99367 TAATGGTGTAACTATTTGGGACGAATGGAAGAACAAAGATGGCGACCTCGGACCGGTATA 99426 || || || || |||||||||||| | || ||||||| ||||| ||||| || Sbjct 282 GCGCGGCGTGACCATCTGGGACGAATGGGCGGACGCCAATGGCGATCTCGGCCCGGTCTA 223 Query 99427 CGGTAAACAGTGGCGGTCTTGG 99448 |||| | || ||||| || ||| Sbjct 222 CGGTCAGCAATGGCGTTCCTGG 201 >seq105722 Length=466 Score = 98.7 bits (108), Expect = 1e-15 Identities = 158/220 (72%), Gaps = 8/220 (4%) Strand=Plus/Minus Query 99233 TTCGGGCACCAGATGCGTTTCAATCTG--CAAGAAGGCTTTCCGCTGGTAACGACTAAGC 99290 ||||| | |||||| || ||| | ||| |||| ||||||||| | | || || ||| Sbjct 359 TTCGGCCGCCAGATCCGCTTCGACCTGGCCAAG--GGCTTTCCGGTCCTGACCACCAAGA 302 Query 99291 -GCTGTCACATGCGTTCGATTATTCA-CGAACTGCTGTGGTTCCTGAAAGGCGATACCAA 99348 |||| ||| |||| ||||| |||| ||| ||||||||||||||||| ||||| ||||| Sbjct 301 AGCTG-CACCTGCGCTCGATC-TTCATCGAGCTGCTGTGGTTCCTGAAGGGCGACACCAA 244 Query 99349 TGTCAAATATTTAAATGATAATGGTGTAACTATTTGGGACGAATGGAAGAACAAAGATGG 99408 ||| ||| | | || || || || |||||||| ||| || || | || Sbjct 243 CGTCCGCTATCTGCAGGACAACAAGGTCCGCATCTGGGACGAGTGGGCCGACGAAAACGG 184 Query 99409 CGACCTCGGACCGGTATACGGTAAACAGTGGCGGTCTTGG 99448 |||||| || || || ||||| || || ||||| || ||| Sbjct 183 CGACCTGGGTCCCGTCTACGGCAAGCAATGGCGCTCGTGG 144 >seq26113 Length=815 Score = 91.5 bits (100), Expect = 2e-13 Identities = 114/154 (74%), Gaps = 2/154 (1%) Strand=Plus/Minus Query 99188 GGCGTGCCGAAGAAAGACCGTACGGGAACCGGTACCCTGTCTATTTTCGGGCACCAGATG 99247 |||||| | || | ||||| || || ||||| || | | || || ||||||||| Sbjct 342 GGCGTGGCCAAAACCGACCGCACCGGCACCGGCACGCGCAGCGTGTTTGGCCACCAGATG 283 Query 99248 CGTTTCAATCTGCAAGAAGGCTTTCCGCTGGTAACGACTAAGC-GCTGTCACATGCGTTC 99306 || ||| | ||| | |||||||||||||| || || || ||| | || ||| |||| || Sbjct 282 CGCTTCGACCTGAACGAAGGCTTTCCGCTAGTCACCACCAAGAAGGTG-CACCTGCGCTC 224 Query 99307 GATTATTCACGAACTGCTGTGGTTCCTGAAAGGC 99340 || || || |||||||||||||||||| | ||| Sbjct 223 CATCATCCAGGAACTGCTGTGGTTCCTGCAGGGC 190 >seq15205 Length=1481 Score = 89.7 bits (98), Expect = 7e-13 Identities = 214/320 (67%), Gaps = 4/320 (1%) Strand=Plus/Minus Query 99857 TCGTGTCAGCTTTATCAACGCAGCGCCGATGTGTTCTTAGGGGTGCCGTTTAATATTGCG 99916 || || ||||| || || ||||||||||| | ||| | || ||||| || || || || Sbjct 1481 TCCTGCCAGCTCTACCAGCGCAGCGCCGACATCTTCCTGGGCGTGCCTTTCAACATCGCC 1422 Query 99917 TCATACGCTTTGTTGATCCACATGTTTGCACAGCAGGCTAACATGACCGTGGGTGATTTC 99976 || || || ||| ||| | || |||||| || || | || || ||| Sbjct 1421 AGCTATGCGCTGCTGACAATGATGCTGGCCCAGCAGTGCGACCTGCAACTCGGCGACTTC 1362 Query 99977 GTCTGGTCTGGTGGTGAC-GT-ACATCTGTACAATAACCATCTGGAACAAACCCGTACCC 100034 ||||| | || || ||| || ||||| ||| | ||||| |||| || | |||| Sbjct 1361 ATCTGGACGGGCGGCGACTGTCACATC--TACGACAACCACGTGGAGCAGGTGCAGACCC 1304 Query 100035 AGTTAGGTCGTGCCCCGCGTCCGTTACCTAAGCTGATTATCAAACGTAAGCCAGACTCCA 100094 || | | || | || || || | || | || | |||||||| ||| | || | Sbjct 1303 AGCTCGCCCGCGAGCCACGACCCTACCCGACCATGCTGATCAAACGCCGGCCGGCGTCGA 1244 Query 100095 TCTTCGAATATAAGTTTGAAGACTTCGAACTTGAAGGCTACGACCCGCATCCTGCAATCA 100154 ||||||| || ||| || |||||||| || |||||||| |||||||| || |||| Sbjct 1243 TCTTCGACTACGAGTACGAGGACTTCGAGCTGAGCGGCTACGAGCCGCATCCGGCCATCA 1184 Query 100155 AAGCACCGGTCGCGATATGA 100174 |||| ||||| || ||||| Sbjct 1183 AAGCCCCGGTGGCCGTATGA 1164 >seq73273 Length=4456 Score = 86.0 bits (94), Expect = 9e-12 Identities = 179/264 (68%), Gaps = 2/264 (1%) Strand=Plus/Minus Query 99188 GGCGTGCCGAAGAAAGACCGTACGGGAACCGGTACCCTGTCTATTTTCGGGCACCAGATG 99247 ||||||| |||| |||||||| || ||||| |||| | ||||| ||||||||| Sbjct 342 GGCGTGCAAAAGAGCGACCGTACCGGCACCGGCACCCGCAGCGTGTTCGGCCACCAGATG 283 Query 99248 CGTTTCAATCTGCAAGAAGGCTTTCCGCTGGTAACGACTAAG-CGCTGTCACATGCGTTC 99306 || ||| | ||| | ||||| ||||| || || || ||| | || ||| || || Sbjct 282 CGCTTCGACCTGAGCCAGGGCTTCCCGCTCGTCACCACCAAGAAGGTG-CACCTGAAGTC 224 Query 99307 GATTATTCACGAACTGCTGTGGTTCCTGAAAGGCGATACCAATGTCAAATATTTAAATGA 99366 || | | || ||||||||||||||| ||||| |||| ||||| | | | || Sbjct 223 CATCGTCCTGGAGCTGCTGTGGTTCCTGCGTGGCGACTCCAACGTCAAGTGGCTGCAGGA 164 Query 99367 TAATGGTGTAACTATTTGGGACGAATGGAAGAACAAAGATGGCGACCTCGGACCGGTATA 99426 || || || || ||| |||||||| | || |||||||| || || || || Sbjct 163 GCGCGGCGTGACGATCTGGAACGAATGGGCGCGGCCCGACGGCGACCTGGGCCCCGTCTA 104 Query 99427 CGGTAAACAGTGGCGGTCTTGGCC 99450 || |||||||| || ||||| Sbjct 103 TGGCGTGCAGTGGCGCTCCTGGCC 80 >seq67505 Length=163 Score = 86.0 bits (94), Expect = 9e-12 Identities = 94/125 (75%), Gaps = 0/125 (0%) Strand=Plus/Plus Query 99326 TGGTTCCTGAAAGGCGATACCAATGTCAAATATTTAAATGATAATGGTGTAACTATTTGG 99385 ||||| ||| |||||||||||| | |||||||||| ||||| || ||| |||||| Sbjct 5 TGGTTTTTGAGCGGCGATACCAATATTCAATATTTAAAAGATAACGGCGTACGCATTTGG 64 Query 99386 GACGAATGGAAGAACAAAGATGGCGACCTCGGACCGGTATACGGTAAACAGTGGCGGTCT 99445 ||||| ||| || | ||| |||| || |||||||| ||| | |||||||| || Sbjct 65 GACGACTGGGCCGACGAGAGCGGCAACCTGGGCCCGGTATATGGTTACCAGTGGCGTTCA 124 Query 99446 TGGCC 99450 ||||| Sbjct 125 TGGCC 129 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 715468106084200