Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavaria_20fumosa_20[genbank_20GCA_5F001179745.1_202015-07-08] 111,201 sequences; 70,469,476 total letters Query= NC_031010.1 Length=246390 Score E Sequences producing significant alignments: (Bits) Value seq26113 159 5e-34 seq73273 156 7e-33 seq107811 136 6e-27 seq105722 132 8e-26 seq23854 123 4e-23 seq71830 116 6e-21 seq67108 102 1e-16 seq107115 89.7 8e-13 >seq26113 Length=815 Score = 159 bits (176), Expect = 5e-34 Identities = 154/198 (78%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 202549 GACCGTACCGGCACCGGCACGCGCTCCTTGTTCGGGGCCCAGATGCGGTTTGACCTGACC 202608 ||||| |||||||||||||||||| | |||| || ||||||||| || ||||||| | Sbjct 327 GACCGCACCGGCACCGGCACGCGCAGCGTGTTTGGCCACCAGATGCGCTTCGACCTGAAC 268 Query 202609 GAAGGCTTCCCACTGGTGACCACGAAAAAGGTTCACCTCCGTTCTATCATTCACGAGCTG 202668 |||||||| || || || ||||| || ||||| ||||| || || ||||| || || ||| Sbjct 267 GAAGGCTTTCCGCTAGTCACCACCAAGAAGGTGCACCTGCGCTCCATCATCCAGGAACTG 208 Query 202669 CTGTGGTTCCTGAAAGGGGACACCAACATCAGTTACCTGAACGATAACGGGGTCACTATC 202728 |||||||||||| | || || | ||| || | ||||| || ||| |||| ||| Sbjct 207 CTGTGGTTCCTGCAGGGCAGCAGCGACAACAACTGGCTGAAGGAACGCGGCGTCAGCATC 148 Query 202729 TGGGACGAATGGGCGCGG 202746 |||||||||||||| ||| Sbjct 147 TGGGACGAATGGGCACGG 130 >seq73273 Length=4456 Score = 156 bits (172), Expect = 7e-33 Identities = 158/206 (77%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 202541 AAAAGAAAGACCGTACCGGCACCGGCACGCGCTCCTTGTTCGGGGCCCAGATGCGGTTTG 202600 |||||| |||||||||||||||||||| ||| | ||||||| ||||||||| || | Sbjct 335 AAAAGAGCGACCGTACCGGCACCGGCACCCGCAGCGTGTTCGGCCACCAGATGCGCTTCG 276 Query 202601 ACCTGACCGAAGGCTTCCCACTGGTGACCACGAAAAAGGTTCACCTCCGTTCTATCATTC 202660 |||||| | | |||||||| || || ||||| || ||||| ||||| || ||| | | Sbjct 275 ACCTGAGCCAGGGCTTCCCGCTCGTCACCACCAAGAAGGTGCACCTGAAGTCCATCGTCC 216 Query 202661 ACGAGCTGCTGTGGTTCCTGAAAGGGGACACCAACATCAGTTACCTGAACGATAACGGGG 202720 |||||||||||||||||| || ||| ||||| ||| | ||| | || ||| | Sbjct 215 TGGAGCTGCTGTGGTTCCTGCGTGGCGACTCCAACGTCAAGTGGCTGCAGGAGCGCGGCG 156 Query 202721 TCACTATCTGGGACGAATGGGCGCGG 202746 | || |||||| |||||||||||||| Sbjct 155 TGACGATCTGGAACGAATGGGCGCGG 130 >seq107811 Length=6275 Score = 136 bits (150), Expect = 6e-27 Identities = 229/328 (70%), Gaps = 14/328 (4%) Strand=Plus/Minus Query 203290 CTATCGTGTCAGTTGTATCAGCGCAGCGCCGATGTCTTCTTAGGCGTGCCGTTTAACATC 203349 || ||||| ||| |||| |||||||||||||| ||||| | ||||||||||| || ||| Sbjct 4409 CTCTCGTGCCAGCTGTACCAGCGCAGCGCCGACATCTTCCTCGGCGTGCCGTTCAATATC 4350 Query 203350 GCCTCGTATGCTTTACTGACTGAGATGGTTGCTCAGCAGG------TCAACATGGTGGCC 203403 |||||||| || | ||||| | ||| | || ||||||| || || || ||| Sbjct 4349 GCCTCGTACGCGCTGCTGACGCACATGATGGCGCAGCAGGCAGGTCTCGACGTG--GGC- 4293 Query 203404 GAGGAGTTCGTCTGGACAGGCGGTGATACACATCTGTATTCCAACCATCTGGAGCAGGCC 203463 || ||||||||||| |||||||| || || ||||| ||||| ||||||||| | Sbjct 4292 ---GACTTCGTCTGGACCGGCGGTGACTGCCACCTCTATTCGAACCACATGGAGCAGGTC 4236 Query 203464 CGTCTGCAGTTAACTCGTGACCCGCACCCATTACCGCGTCTGAAATTCAAACGTAAGCCC 203523 ||| | | || | ||||| || | || || |||| || ||||| Sbjct 4235 GACGAACAGCTCGCGCGCGCCCCGCTGCCGCTGCCCAAGCTCGTCATCAAGCGCAAGCCG 4176 Query 203524 GAGTCTATCTTCGACTACCAGTTCGAAGACTTTGAAATCGAAGGCTACGTTTCCCACGAC 203583 || | | ||||||||| ||||| ||||| || |||| ||||||| || || | | Sbjct 4175 GACACGCTGTTCGACTACACCTTCGACGACTTCGAGATCGTCGGCTACGCGTCGCATG-C 4117 Query 203584 GC-CATCAAAGCACCGGTTGCCATTTAA 203610 || |||||| || ||||| ||| | ||| Sbjct 4116 GCACATCAAGGCGCCGGTGGCCGTGTAA 4089 Score = 120 bits (132), Expect = 5e-22 Identities = 143/194 (74%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 202549 GACCGTACCGGCACCGGCACGCGCTCCTTGTTCGGGGCCCAGATGCGGTTTGACCTGACC 202608 ||||| || |||||||||||| |||| ||||||| ||||||||| || | || Sbjct 4826 GACCGCACGGGCACCGGCACGGTCTCCGTGTTCGGCCACCAGATGCGCTTCAATTTGCAG 4767 Query 202609 GAAGGCTTCCCACTGGTGACCACGAAAAAGGTTCACCTCCGTTCTATCATTCACGAGCTG 202668 || || || || || ||||| || || ||| | || || || ||||| || || ||| Sbjct 4766 GATGGTTTTCCGCTCGTGACGACCAAGAAGCTGCATCTGAAGTCGATCATCCATGAACTG 4707 Query 202669 CTGTGGTTCCTGAAAGGGGACACCAACATCAGTTACCTGAACGATAACGGGGTCACTATC 202728 | ||||||||| ||| |||||||||| | || ||||| || ||||| |||| ||| Sbjct 4706 ATCTGGTTCCTGGCGGGGTCCACCAACATCGGCTATCTGAAGGAAAACGGCGTCAAGATC 4647 Query 202729 TGGGACGAATGGGC 202742 |||||||| ||||| Sbjct 4646 TGGGACGAGTGGGC 4633 >seq105722 Length=466 Score = 132 bits (146), Expect = 8e-26 Identities = 148/195 (76%), Gaps = 2/195 (1%) Strand=Plus/Minus Query 202549 GACCGTACCGGCACCGGCACGCGCTCCTTGTTCGGGGCCCAGATGCGGTTTGACCTGACC 202608 || || || ||||| ||||| | | | ||||||| |||||| || || |||||| || Sbjct 389 GATCGCACGGGCACGGGCACACTCGGCGTGTTCGGCCGCCAGATCCGCTTCGACCTGGCC 330 Query 202609 GAAGGCTTCCCACTGGTGACCACGAAAAAGGTTCACCTCCGTTCTATCATTCA-CGAGCT 202667 | ||||| || | ||||||| || ||| | ||||| || || ||| |||| |||||| Sbjct 329 AAGGGCTTTCCGGTCCTGACCACCAAGAAGCTGCACCTGCGCTCGATC-TTCATCGAGCT 271 Query 202668 GCTGTGGTTCCTGAAAGGGGACACCAACATCAGTTACCTGAACGATAACGGGGTCACTAT 202727 ||||||||||||||| || ||||||||| || | || ||| | || ||| |||| || Sbjct 270 GCTGTGGTTCCTGAAGGGCGACACCAACGTCCGCTATCTGCAGGACAACAAGGTCCGCAT 211 Query 202728 CTGGGACGAATGGGC 202742 ||||||||| ||||| Sbjct 210 CTGGGACGAGTGGGC 196 >seq23854 Length=6065 Score = 123 bits (136), Expect = 4e-23 Identities = 148/201 (74%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 202543 AAGAAAGACCGTACCGGCACCGGCACGCGCTCCTTGTTCGGGGCCCAGATGCGGTTTGAC 202602 ||| | |||||||||||||| |||||| || |||||||| ||||||||||||||| Sbjct 452 AAGCAGGACCGTACCGGCACGGGCACGAAATCGGTGTTCGGGCATCAGATGCGGTTTGAC 393 Query 202603 CTGACCGAAGGCTTCCCACTGGTGACCACGAAAAAGGTTCACCTCCGTTCTATCATTCAC 202662 || |||| || || || || |||| ||||| ||| | || || || ||||| | Sbjct 392 CTCGCCGACGGATTTCCGTTGCTGACGACGAAGAAGCTGCATCTGAAGTCGATCATCGTC 333 Query 202663 GAGCTGCTGTGGTTCCTGAAAGGGGACACCAACATCAGTTACCTGAACGATAACGGGGTC 202722 |||||||||||||||||| || || || || || | ||| | || ||| || Sbjct 332 GAGCTGCTGTGGTTCCTGCGCGGCGAGACGAATGTCGCCTGGCTGCAGGAGCGCGGCGTG 273 Query 202723 ACTATCTGGGACGAATGGGCG 202743 || |||||||||||||||||| Sbjct 272 ACCATCTGGGACGAATGGGCG 252 >seq71830 Length=566 Score = 116 bits (128), Expect = 6e-21 Identities = 149/203 (73%), Gaps = 2/203 (1%) Strand=Plus/Plus Query 202541 AAAAGAAAGACCGTACCGGCACCGGCACGCGCTCCT-TGTTCGGGGCCCAGATGCGGTTT 202599 ||||| | |||||||||||||||||||| | | | |||| || ||| ||||| ||| Sbjct 214 AAAAGCACGACCGTACCGGCACCGGCAC-CATTAGTGTGTTTGGCTACCAAATGCGTTTT 272 Query 202600 GACCTGACCGAAGGCTTCCCACTGGTGACCACGAAAAAGGTTCACCTCCGTTCTATCATT 202659 | | | || || ||||| |||||||| || |||||| | ||| | || ||||| Sbjct 273 AATTTAAAAGACGGTTTCCCGCTGGTGACGACCAAAAAGCTGCACTTGAAATCGATCATC 332 Query 202660 CACGAGCTGCTGTGGTTCCTGAAAGGGGACACCAACATCAGTTACCTGAACGATAACGGG 202719 |||||| || | ||||| ||| || || ||||| |||| ||||| || |||||||| Sbjct 333 CACGAGTTGATCTGGTTTTTGAGCGGTGATACCAATATCAAATACCTAAAAGATAACGGC 392 Query 202720 GTCACTATCTGGGACGAATGGGC 202742 || | || |||||||| ||||| Sbjct 393 GTAAAAATTTGGGACGAGTGGGC 415 >seq67108 Length=1010 Score = 102 bits (112), Expect = 1e-16 Identities = 207/305 (68%), Gaps = 8/305 (3%) Strand=Plus/Plus Query 203303 TGTATCAGCGCAGCGCCGATGTCTTCTTAGGCGTGCCGTTTAACATCGCCTCGTATGCTT 203362 |||| |||||||||||||| ||||| |||||||||| || ||||||||| ||||| | Sbjct 3 TGTACCAGCGCAGCGCCGACATCTTCCTAGGCGTGCCCTTCAACATCGCCAGCTATGCGT 62 Query 203363 TACTGACTGAGATGGTTGCTCAGCAG-GTCAACATGGTGGCCGAG---GAGTTCGTCTGG 203418 | || || | ||||| || |||||| || | | |||||| | || ||| ||||| Sbjct 63 TGCTCACGCACATGGTGGCGCAGCAGTGTGACC----TGGCCGTGGGTGACTTCATCTGG 118 Query 203419 ACAGGCGGTGATACACATCTGTATTCCAACCATCTGGAGCAGGCCCGTCTGCAGTTAACT 203478 |||||||| ||| ||| | || |||||| |||| |||| || | | Sbjct 119 ACAGGCGGCGATTGCCATATCTACAGCAACCACGTGGACCAGGTGAACGAACAACTGAGC 178 Query 203479 CGTGACCCGCACCCATTACCGCGTCTGAAATTCAAACGTAAGCCCGAGTCTATCTTCGAC 203538 || | || |||| | ||| |||| | |||| || ||||| | ||||||| | Sbjct 179 CGCGCGCCCTACCCCTACCCGACTCTGCACATCAAGCGCAAGCCGGCCGATATCTTCAGC 238 Query 203539 TACCAGTTCGAAGACTTTGAAATCGAAGGCTACGTTTCCCACGACGCCATCAAAGCACCG 203598 ||| |||| || || || || | | |||| | |||| ||||||||||| ||| Sbjct 239 TACGAGTTTGAGGATTTCGAGGTGCTGGACTACCAATGCCACCCGGCCATCAAAGCCCCG 298 Query 203599 GTTGC 203603 || || Sbjct 299 GTGGC 303 >seq107115 Length=5642 Score = 89.7 bits (98), Expect = 8e-13 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 2711 GTAGCTCAGACGGTTAGAGTGCCGCCCTGTCACGGCGGAGGTCGCGGGTTCGAAACCCGT 2770 ||||||||| ||||||||||||| ||||||||| |||||||||||||||||| ||||| Sbjct 3011 GTAGCTCAGTTGGTTAGAGTGCCGGCCTGTCACGCCGGAGGTCGCGGGTTCGAGCCCCGT 3070 Query 2771 CAGTCCTGCCAT 2782 | ||| ||||| Sbjct 3071 CGCTCCCGCCAT 3082 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 787224225346000