Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavaria_20fumosa_20[genbank_20GCA_5F001179745.1_202015-07-08] 111,201 sequences; 70,469,476 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq109776 120 4e-22 seq103458 105 1e-17 seq18333 98.7 1e-15 seq19778 86.0 9e-12 >seq109776 Length=48066 Score = 120 bits (132), Expect = 4e-22 Identities = 357/540 (66%), Gaps = 12/540 (2%) Strand=Plus/Plus Query 46650 GCCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGCCCAGGCATTAGTCCACGCTT 46709 |||||| |||| || || | || || |||||||| | || ||||| || || ||||| Sbjct 3926 GCCTTCGTCTCGGCTGATGAGCTCATTGGAAAATGTCAAGCCGGGCATGAGACCGCGCTT 3985 Query 46710 TTTGAGCCAAAATATAGCCGCGAAAGATCCAGAAAAGAATATGCCTTCTACAGCCGCGAA 46769 || |||||||| || ||||||||||| || || ||||| || || || || || || || Sbjct 3986 CTTCAGCCAAAAAATGGCCGCGAAAGAACCGGAGAAGAAGATCCCCTCAACCGCAGCAAA 4045 Query 46770 TGCGACAAGTCTCTCTCCGTAAC--TGGCATCAT-TATG-AATCCACCTTTGAGCCCAAT 46825 |||| || | ||| | ||| | | || | | | |||||| | ||||||| | Sbjct 4046 AGCGATGAGGCGCTCAGC-AAACGAAGTCTTCTTGTCCGAAATCCAGCGAAGAGCCCATT 4104 Query 46826 CAGCCTTTTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAGAAAGtttttttCAT 46885 | || || ||| ||||| || || || || | ||| | || || | | |||| Sbjct 4105 CTGCTTTGCGCTTGACACAGGGAATGGTCTCGACAGCGTCGAAAAGGTATTCACGTTCAG 4164 Query 46886 CACTATCTTTAACATATGTATCTATTAAAAGACTATACATTTCTGAATGAATGTTTTCAA 46945 || ||||||| || ||||| || | ||| || | || || |||||||| || | Sbjct 4165 CAGGGTCTTTAATGTAAGTATCAATGAGAAGCGAGTAGGTCTCGGAGTGAATGTTCTCCA 4224 Query 46946 TAGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATCTGTACCTCTGTACAAAATC 47005 | || ||||| ||||| || || | || || | || ||||| | | || | Sbjct 4225 TCATGATTTGAAAACCGTAGAAGCAGCGAGCCTCTGCGGCTTGGACCTCATTCGAGAAGC 4284 Query 47006 GTTCAGAC-AAATTCTCATTCACTATTCCATCACTAGCAGCAAAAAATGCCAATACATGT 47064 | || ||| | ||||| || || || |||||| || ||||| || || | ||||| Sbjct 4285 GCTC-GACGAGGTTCTCGTTGACGATACCATCAGAGGCTGCAAAGAAAGCGAGGACATGA 4343 Query 47065 TTAATAAAATATTTTTCATCG--GT--AGTCAGTTTATTCCAGTCATTGATATCTTTTGA 47120 || |||| || | | || || | | || |||||||||| | ||| ||||| Sbjct 4344 GAGATGAAATGACGCTCGTTGTCGTTGAGGC-GGTTCTTCCAGTCATGTAAATCCTTTGA 4402 Query 47121 TATATCTACTTCTTCAGCTGTCCAGAATGACGCCTCTGCTTTTTTATACATATTCCATAT 47180 | || | || || || ||||| ||||| || || || || || ||||| | |||||| Sbjct 4403 GAGGTCCATCTCCTCTGCAGTCCAAAATGAGGCTTCGGCCTTCTTGTACATTTGCCATAT 4462 >seq103458 Length=5285 Score = 105 bits (116), Expect = 1e-17 Identities = 186/269 (69%), Gaps = 8/269 (3%) Strand=Plus/Minus Query 76867 AATAGATAGGCCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAGCGTTTCAATGTGTC 76926 |||| ||| || || ||||| || | || ||| | ||| || || | |||||| Sbjct 1289 AATACTTAGTCCAATGCCTCCAGCGGTCTTGCTGATCATAGCGCAATTCTTGAGTGTGTC 1230 Query 76927 ATAGATGCCCTCTATACTATCATCCATCATG----TTAAGAAGAAAACAGCTAGACATTT 76982 ||||| ||||| || ||||| || |||| | ||||| | ||| ||| ||||| Sbjct 1229 GTAGATACCCTCAATGCTATCTTCTTTCATACAGATCAAGAA-ACAACTGCT---CATTT 1174 Query 76983 GATGATGAACAGTTCCTGCATTAAACAATGTAGGAGATGCATGAGTGAACCATTTTTCAG 77042 | |||| || || || || |||| || |||||||| |||||||| | ||||| Sbjct 1173 GCGGATGTGGCGTGCCAGCGTTGAACAGGGTCGGAGATGCGTGAGTGAAGTAGCGTTCAG 1114 Query 77043 AAAGTAGATTGTATGTTTCAATAACTGCTTCTATATCCCATTGATGAATTCCTACAGCGA 77102 | | |||||||| ||||| | |||| ||| || || | ||||| || || |||| Sbjct 1113 ACATGAGATTGTAGGTTTCCAAAACTCGTTCAATGTCTGAACCGTGAATGCCAACCGCGA 1054 Query 77103 CACGCATCAACATATGCTGAGGTCGTTCT 77131 ||||||| | ||| || ||||| |||||| Sbjct 1053 CACGCATGATCATGTGTTGAGGGCGTTCT 1025 >seq18333 Length=334 Score = 98.7 bits (108), Expect = 1e-15 Identities = 154/218 (71%), Gaps = 2/218 (1%) Strand=Plus/Minus Query 76914 GTTTCAATGTGTCATAGATGCCCTCTATACTATCATCCATCATG-TTAAGAAGAAAACAG 76972 ||||||| || ||||| || || || ||||| |||||| ||||| |||| || |||||| Sbjct 251 GTTTCAACGTATCATATATACCATCAATACTGTCATCCTTCATGGTTAATAA-AAAACAT 193 Query 76973 CTAGACATTTGATGATGAACAGTTCCTGCATTAAACAATGTAGGAGATGCATGAGTGAAC 77032 |||||||| | | | || |||||||||||||| ||||| | ||| || || ||| Sbjct 192 GATGACATTTGTGGCTTAGGGGTGCCTGCATTAAACAAGGTAGGGGTTGCGTGCGTAAAC 133 Query 77033 CATTTTTCAGAAAGTAGATTGTATGTTTCAATAACTGCTTCTATATCCCATTGATGAATT 77092 || || | || | ||| |||| || | ||| |||||| || ||| || Sbjct 132 CAACGCTCGCTCATCAGGTGGTAGGTTTTGATGGCGCTTTCAATATCCGCTTTATGGATC 73 Query 77093 CCTACAGCGACACGCATCAACATATGCTGAGGTCGTTC 77130 || || | |||||||| |||| |||||| || || || Sbjct 72 CCAACCGATACACGCATAAACAAATGCTGCGGGCGCTC 35 >seq19778 Length=343 Score = 86.0 bits (94), Expect = 9e-12 Identities = 197/294 (67%), Gaps = 2/294 (1%) Strand=Plus/Minus Query 76877 CCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAGCGTTTCAATGTGTCATAGATGCCC 76936 || || || ||||| ||| |||||| ||| |||||| ||| || || || || Sbjct 297 CCGATACCACCTGCGCTTTGCGAGATTTTGGCAGTTTGTTTCAGTGTATCGTATATACCA 238 Query 76937 TCTATACTATCATCCATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGAACAGTT 76996 || ||||| || || ||||| | || | ||||| |||||||| | | || Sbjct 237 TCAATACTGTCGTCTTTCATGGTTAGTAAGAAACATGATGACATTTGTGGTTTCGGCGTA 178 Query 76997 CCTGCATTAAACAATGTAGGAGATGCATGAGTGAACCATTTTTCAGAAAGTAGATTGTAT 77056 || || || ||||| ||||| | || ||||| ||||| || | || || ||| Sbjct 177 CCGGCGTTGAACAAAGTAGGGGTAGCGTGAGTAAACCAGCGCTCGCTCATTAAATGGTAG 118 Query 77057 GTTTCAATAACTGCTT-CTATATCCCATTGATGAATTCCTACAGCGACACGCATCAACAT 77115 |||| ||| | |||| | ||||| || ||| || ||||| | || ||||| || | Sbjct 117 GTTTTAATGGC-GCTTGCAATATCTTCTTTATGGATACCTACCGATACGCGCATAAATAA 59 Query 77116 ATGCTGAGGTCGTTCTACAGTCTTATTATTTATTTTCAACAAGTATGATTTTTC 77169 |||||| || ||||| || | ||| || | || |||| |||||||||||| Sbjct 58 ATGCTGCGGGCGTTCGGCAATTTTACCATCAAGCTTTAACAGGTATGATTTTTC 5 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 711943412272320