Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavaria_20fumosa_20[genbank_20GCA_5F001179745.1_202015-07-08] 111,201 sequences; 70,469,476 total letters Query= NC_031052.1 Length=57804 Score E Sequences producing significant alignments: (Bits) Value seq109454 134 5e-27 seq109371 118 4e-22 seq36499 98.7 4e-16 seq81106 91.5 5e-14 >seq109454 Length=55839 Score = 134 bits (148), Expect = 5e-27 Identities = 107/129 (83%), Gaps = 0/129 (0%) Strand=Plus/Plus Query 44783 ACTGGGTGATCGTCGGCGGCGAATCCGGCCGGGGCGCGCGACCGATGCACCCCGACTGGG 44842 ||||||||||| |||||||||| ||||| |||||| ||||||| ||||| ||||| Sbjct 47887 ACTGGGTGATCTGCGGCGGCGAAAGCGGCCACCACGCGCGGCCGATGCTCCCCGCCTGGG 47946 Query 44843 CGCGGGCCCTGCGCGACCAGTGCGTCGACGCCGGTGTGCCGTTCCTGTTTAAGCAGTTTG 44902 | || | ||||||||||||||||| | |||||| |||||||||||||| ||||| | | Sbjct 47947 CCCGAGACCTGCGCGACCAGTGCGAGGCCGCCGGCGTGCCGTTCCTGTTCAAGCAATGGG 48006 Query 44903 GCGAGTGGA 44911 ||||||||| Sbjct 48007 GCGAGTGGA 48015 >seq109371 Length=32687 Score = 118 bits (130), Expect = 4e-22 Identities = 106/133 (80%), Gaps = 0/133 (0%) Strand=Plus/Minus Query 44783 ACTGGGTGATCGTCGGCGGCGAATCCGGCCGGGGCGCGCGACCGATGCACCCCGACTGGG 44842 ||||| | |||||||| ||||| ||| | |||||||| |||||||||||| ||||| Sbjct 5633 ACTGGATCATCGTCGGAGGCGAGAGCGGGCCTGGCGCGCGTCCGATGCACCCCAGCTGGG 5574 Query 44843 CGCGGGCCCTGCGCGACCAGTGCGTCGACGCCGGTGTGCCGTTCCTGTTTAAGCAGTTTG 44902 | || ||||||||||||||||||| | ||| | ||| |||| | || ||||||| | Sbjct 5573 CCCGCGCCCTGCGCGACCAGTGCGCGGCGGCCAGCGTGGCGTTTCACTTCAAGCAGTGGG 5514 Query 44903 GCGAGTGGATCGA 44915 ||||||||||||| Sbjct 5513 GCGAGTGGATCGA 5501 >seq36499 Length=515 Score = 98.7 bits (108), Expect = 4e-16 Identities = 99/129 (77%), Gaps = 0/129 (0%) Strand=Plus/Plus Query 44782 GACTGGGTGATCGTCGGCGGCGAATCCGGCCGGGGCGCGCGACCGATGCACCCCGACTGG 44841 || ||||| ||||||| |||||||||||| ||||| || ||||||||||| || ||| Sbjct 267 GATTGGGTCGTCGTCGGGGGCGAATCCGGCGATGGCGCACGGCCGATGCACCCAGAGTGG 326 Query 44842 GCGCGGGCCCTGCGCGACCAGTGCGTCGACGCCGGTGTGCCGTTCCTGTTTAAGCAGTTT 44901 || || | || ||||| || |||| | ||||| ||||| || || || ||||| | Sbjct 327 GCTCGATCACTCCGCGATCAATGCGCGGCTGCCGGCGTGCCATTTCTTTTCAAGCAATGG 386 Query 44902 GGCGAGTGG 44910 ||||||||| Sbjct 387 GGCGAGTGG 395 >seq81106 Length=13242 Score = 91.5 bits (100), Expect = 5e-14 Identities = 98/130 (75%), Gaps = 0/130 (0%) Strand=Plus/Plus Query 44779 CTCGACTGGGTGATCGTCGGCGGCGAATCCGGCCGGGGCGCGCGACCGATGCACCCCGAC 44838 ||||||||||| ||| |||||||| ||||| ||||| ||||||||||| | Sbjct 8758 CTCGACTGGGTCATCTGTGGCGGCGAGAGCGGCCCCAAGGCGCGTCCGATGCACCCGGCA 8817 Query 44839 TGGGCGCGGGCCCTGCGCGACCAGTGCGTCGACGCCGGTGTGCCGTTCCTGTTTAAGCAG 44898 ||||| || | ||| ||||| ||||||| | |||| ||||||||| |||| |||||| Sbjct 8818 TGGGCCCGAGGCCTCCGCGATCAGTGCGCGGCCGCCAAGGTGCCGTTCTTGTTCAAGCAG 8877 Query 44899 TTTGGCGAGT 44908 | || |||| Sbjct 8878 TGGGGTGAGT 8887 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 184607101795292