Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavaria_20fumosa_20[genbank_20GCA_5F001179745.1_202015-07-08] 111,201 sequences; 70,469,476 total letters Query= NC_031074.1 Length=92580 Score E Sequences producing significant alignments: (Bits) Value seq107811 289 2e-73 seq15205 196 3e-45 seq73273 150 1e-31 seq67108 149 4e-31 seq26113 123 1e-23 seq105722 116 2e-21 seq111164 107 1e-18 seq23854 96.9 2e-15 seq71830 89.7 3e-13 >seq107811 Length=6275 Score = 289 bits (320), Expect = 2e-73 Identities = 524/749 (70%), Gaps = 27/749 (4%) Strand=Plus/Minus Query 836 GATCGCACCGGCACCGGCACGCTGAGCAAGTTCGGCGCCCAGCTGCGGTACGACCTCACC 895 || ||||| |||||||||||| | | ||||||| |||| |||| | | | | Sbjct 4826 GACCGCACGGGCACCGGCACGGTCTCCGTGTTCGGCCACCAGATGCGCTTCAATTTGCAG 4767 Query 896 GAGGGCTTCCCGCTGGTCACCACGAAGCGCGTCCACTTCAAATCGGTTGCGTACGAACTT 955 || || || ||||| || || || ||| | || | || ||| | | ||||| Sbjct 4766 GATGGTTTTCCGCTCGTGACGACCAAGAAGCTGCATCTGAAGTCGATCATCCATGAACTG 4707 Query 956 CTGTGGTTCCTCAGTGGCGACACGAACGTGAAGGC--GCTCAACGACAACGGCGTCACCA 1013 | |||||||| || ||| ||| | ||| || || || |||||||||| | Sbjct 4706 ATCTGGTTCCTGGCGGGGTCCACCAACAT--CGGCTATCTGAAGGAAAACGGCGTCAAGA 4649 Query 1014 TCTGGGACGAGTGGGCCGACGCCGGCGGAAACCTCGGTCCTGTCTACGGCGCGCAGTGGC 1073 ||||||||||||||||||| | ||| |||||||||| |||||||| ||||||| Sbjct 4648 TCTGGGACGAGTGGGCCGATGAAAACGGCGACCTCGGTCCGATCTACGGCTACCAGTGGC 4589 Query 1074 GGCACTGGCATGTCGAGGACGGAGGATCGTCGTGGATTGACCAGATCTCGGCC--GCCGT 1131 | |||||| || | |||| | || | | || ||||||| || ||| | | | Sbjct 4588 GCAACTGGC----CGGCGCCGGACGGCCGCCAT--ATCGACCAGA--TCAGCCAGGTCAT 4537 Query 1132 GGAGCTGCTTCGCGAGGAC-CCTGACTCGCGCCGGAACGTGGTATCCGCATGGAACGTCG 1190 ||| | | | ||| || || || || |||||||| | | | || || ||||||||||| | Sbjct 4536 GGAACAGATCCGC-AGCACGCCCGATTCGCGCCGCATCATCGTCTCGGCATGGAACGTGG 4478 Query 1191 GTGACCTCAGCGACATGGCACTTCACCCGTGCCACATCATGTTCCAGCTGTACGTCGTCG 1250 ||| || | ||| ||| | || |||||| |||||||| | ||||||| || Sbjct 4477 CCGACATCCCGCAGATGAAACTGCCGCCTTGCCACGCGCTGTTCCAGTTCTACGTCGCCG 4418 Query 1251 ACGGCCGGCTCTCGCTGCAGGTCTACCAGCGCAGCGCGGACATGTTCCTCGGTGTGCCGT 1310 | ||| ||||||| ||| | |||||||||||||| ||||| |||||||| ||||||| Sbjct 4417 ATGGCAAGCTCTCGTGCCAGCTGTACCAGCGCAGCGCCGACATCTTCCTCGGCGTGCCGT 4358 Query 1311 TCAATATCGCCTCGTACGCGCTCCTCGCGCACATGTTCGCGCAGCAGGCCGGCCTGCGGG 1370 |||||||||||||||||||||| || |||||||| | ||||||||||| || || | Sbjct 4357 TCAATATCGCCTCGTACGCGCTGCTGACGCACATGATGGCGCAGCAGGCAGGTCTCGACG 4298 Query 1371 TGGGTGAGCTGATCTGGACCGGCGGCGACTGCCACATCTACAACAACCACGTCGACCAGG 1430 |||| || | ||||||||||||| ||||||||| |||| |||||| | || |||| Sbjct 4297 TGGGCGACTTCGTCTGGACCGGCGGTGACTGCCACCTCTATTCGAACCACATGGAGCAGG 4238 Query 1431 -CGCTGATGCAGCTC-CGC-CGACGACCGCGGCC-CTACCCGAGGCTCGTGCTACACCAC 1486 || || |||||| ||| || | |||| ||| || ||| | |||||| | | | | Sbjct 4237 TCGACGA-ACAGCTCGCGCGCGCC--CCGCTGCCGCTGCCC-AAGCTCGTCATCAAGCGC 4182 Query 1487 GCGCCG---TCGATCTTCGACTACCGGTACGAGCACATCCACCTCGTGAACTACGACCCG 1543 |||| || | ||||||||| | ||| || || | |||| ||||| || Sbjct 4181 AAGCCGGACACGCTGTTCGACTACACCTTCGACGACTTCGAGATCGTCGGCTACGCGTCG 4122 Query 1544 CACCCGTCGATCAAGGCGCCGGTGGCCGT 1572 || || |||||||||||||||||||| Sbjct 4121 CATGCGCACATCAAGGCGCCGGTGGCCGT 4093 >seq15205 Length=1481 Score = 196 bits (216), Expect = 3e-45 Identities = 233/313 (74%), Gaps = 5/313 (2%) Strand=Plus/Minus Query 1268 CAGGTCTACCAGCGCAGCGCGGACATGTTCCTCGGTGTGCCGTTCAATATCGCCTCGTAC 1327 ||| |||||||||||||||| ||||| ||||| || ||||| ||||| |||||| || Sbjct 1475 CAGCTCTACCAGCGCAGCGCCGACATCTTCCTGGGCGTGCCTTTCAACATCGCCAGCTAT 1416 Query 1328 GCGCTCCTCGCGCACATGTTCGCGCAGCAGGCCGGCCTGCGGGTGGGTGAGCTGATCTGG 1387 ||||| || | ||| | || |||||| || ||||| | || || | |||||| Sbjct 1415 GCGCTGCTGACAATGATGCTGGCCCAGCAGTGCGACCTGCAACTCGGCGACTTCATCTGG 1356 Query 1388 ACCGGCGGCGACTGCCACATCTACAACAACCACGTCGACCAGGCGCTGATGCAGCTCCGC 1447 || ||||||||||| ||||||||| |||||||||| || |||| || || ||||| ||| Sbjct 1355 ACGGGCGGCGACTGTCACATCTACGACAACCACGTGGAGCAGGTGCAGACCCAGCT-CGC 1297 Query 1448 CGACGA-CCGCGGCCCTACCCG---AGGCTCGTGCTACACCACGCGCCGTCGATCTTCGA 1503 | ||| || || ||||||||| | ||| | || || || ||||||||||||| Sbjct 1296 CCGCGAGCCACGACCCTACCCGACCATGCTGATCAAACGCCGGCCGGCGTCGATCTTCGA 1237 Query 1504 CTACCGGTACGAGCACATCCACCTCGTGAACTACGACCCGCACCCGTCGATCAAGGCGCC 1563 |||| ||||||| || || | || |||||| ||||| ||| | ||||| || || Sbjct 1236 CTACGAGTACGAGGACTTCGAGCTGAGCGGCTACGAGCCGCATCCGGCCATCAAAGCCCC 1177 Query 1564 GGTGGCCGTCTGA 1576 ||||||||| ||| Sbjct 1176 GGTGGCCGTATGA 1164 >seq73273 Length=4456 Score = 150 bits (166), Expect = 1e-31 Identities = 215/298 (72%), Gaps = 6/298 (2%) Strand=Plus/Minus Query 788 TACGAAGACCTGTTGCGCGACATCCTGGAGACTGGCAAGTCGAAGGATGATCGCACCGGC 847 ||||||||| | ||||| | | | ||| |||| | ||| || || |||||| Sbjct 375 TACGAAGACTTCATGCGCCATGTGTTCGAGCATGGCGTGCAAAAGAGCGACCGTACCGGC 316 Query 848 ACCGGCACGCTGAGCAAGTTCGGCGCCCAGCTGCGGTACGACCTCACCGAGGGCTTCCCG 907 |||||||| | ||| ||||||| |||| |||| | |||||| | | ||||||||||| Sbjct 315 ACCGGCACCCGCAGCGTGTTCGGCCACCAGATGCGCTTCGACCTGAGCCAGGGCTTCCCG 256 Query 908 CTGGTCACCACGAAGCGCGTCCACTTCAAATCGGTTGCGTAC--GAACTTCTGTGGTTCC 965 || |||||||| ||| || ||| | || || | ||| | || || |||||||||| Sbjct 255 CTCGTCACCACCAAGAAGGTGCACCTGAAGTCCAT--CGTCCTGGAGCTGCTGTGGTTCC 198 Query 966 TCAGTGGCGACACGAACGTGAAGGCGCTCAACGACAACGGCGTCACCATCTGGGACGAGT 1025 | |||||||| | ||||| ||| ||| | || |||||| || |||||| |||| | Sbjct 197 TGCGTGGCGACTCCAACGTCAAGTGGCTGCAGGAGCGCGGCGTGACGATCTGGAACGAAT 138 Query 1026 GGGC-CGACGCCGGCGGAAACCTCGGTCCTGTCTACGGCGCGCAGTGGCGGCACTGGC 1082 |||| || | ||| ||| |||| || || ||||| |||| ||||||||| ||||| Sbjct 137 GGGCGCGGC-CCGACGGCGACCTGGGCCCCGTCTATGGCGTGCAGTGGCGCTCCTGGC 81 >seq67108 Length=1010 Score = 149 bits (164), Expect = 4e-31 Identities = 127/157 (81%), Gaps = 0/157 (0%) Strand=Plus/Plus Query 1274 TACCAGCGCAGCGCGGACATGTTCCTCGGTGTGCCGTTCAATATCGCCTCGTACGCGCTC 1333 |||||||||||||| ||||| ||||| || ||||| ||||| |||||| || ||| | Sbjct 5 TACCAGCGCAGCGCCGACATCTTCCTAGGCGTGCCCTTCAACATCGCCAGCTATGCGTTG 64 Query 1334 CTCGCGCACATGTTCGCGCAGCAGGCCGGCCTGCGGGTGGGTGAGCTGATCTGGACCGGC 1393 ||| |||||||| | ||||||||| | |||| |||||||| | |||||||| ||| Sbjct 65 CTCACGCACATGGTGGCGCAGCAGTGTGACCTGGCCGTGGGTGACTTCATCTGGACAGGC 124 Query 1394 GGCGACTGCCACATCTACAACAACCACGTCGACCAGG 1430 ||||| ||||| ||||||| ||||||||| ||||||| Sbjct 125 GGCGATTGCCATATCTACAGCAACCACGTGGACCAGG 161 >seq26113 Length=815 Score = 123 bits (136), Expect = 1e-23 Identities = 180/249 (72%), Gaps = 4/249 (2%) Strand=Plus/Minus Query 836 GATCGCACCGGCACCGGCACGCTGAGCAAGTTCGGCGCCCAGCTGCGGTACGACCTCACC 895 || ||||||||||||||||||| ||| ||| ||| |||| |||| | |||||| | | Sbjct 327 GACCGCACCGGCACCGGCACGCGCAGCGTGTTTGGCCACCAGATGCGCTTCGACCTGAAC 268 Query 896 GAGGGCTTCCCGCTGGTCACCACGAAGCGCGTCCACTTCAAATCGGTTGCGTACGAACTT 955 || ||||| ||||| |||||||| ||| || ||| | || | | ||||| Sbjct 267 GAAGGCTTTCCGCTAGTCACCACCAAGAAGGTGCACCTGCGCTCCATCATCCAGGAACTG 208 Query 956 CTGTGGTTCCT-CAGTGGCGACACGAACGTGAAGGCGCTCAACGACAACGGCGTCACCAT 1014 ||||||||||| ||| ||| || || || ||| || || |||||||| ||| Sbjct 207 CTGTGGTTCCTGCAG-GGCAGCAGCGACAACAACTGGCTGAAGGAACGCGGCGTCAGCAT 149 Query 1015 CTGGGACGAGTGGGC-CGACGCCGGCGGAAACCTCGGTCCTGTCTACGGCGCGCAGTGGC 1073 ||||||||| ||||| || | ||| ||| | ||| || || |||||||||| ||| |||| Sbjct 148 CTGGGACGAATGGGCACGGC-CCGACGGCAGCCTAGGCCCGGTCTACGGCGTGCAATGGC 90 Query 1074 GGCACTGGC 1082 | ||||| Sbjct 89 GCAGCTGGC 81 >seq105722 Length=466 Score = 116 bits (128), Expect = 2e-21 Identities = 174/243 (72%), Gaps = 8/243 (3%) Strand=Plus/Minus Query 836 GATCGCACCGGCACCGGCACGCTGAGCAAGTTCGGCGCCCAGCTGCGGTACGACCTCACC 895 |||||||| ||||| ||||| || || ||||||| |||| | || | |||||| || Sbjct 389 GATCGCACGGGCACGGGCACACTCGGCGTGTTCGGCCGCCAGATCCGCTTCGACCTGGCC 330 Query 896 GAGGGCTTCCCG---CTGGTCACCACGAAGCGCGTCCACTTCAAATCGGT-TGCGTACGA 951 ||||||| ||| ||| ||||| ||||| | ||| | ||| | | | | ||| Sbjct 329 AAGGGCTTTCCGGTCCTGACCACCAAGAAGC---TGCACCTGCGCTCGATCTTCAT-CGA 274 Query 952 ACTTCTGTGGTTCCTCAGTGGCGACACGAACGTGAAGGCGCTCAACGACAACGGCGTCAC 1011 || ||||||||||| | |||||||| ||||| || | |||||| ||| Sbjct 273 GCTGCTGTGGTTCCTGAAGGGCGACACCAACGTCCGCTATCTGCAGGACAACAAGGTCCG 214 Query 1012 CATCTGGGACGAGTGGGCCGACGCCGGCGGAAACCTCGGTCCTGTCTACGGCGCGCAGTG 1071 ||||||||||||||||||||||| ||| |||| ||||| ||||||||| ||| || Sbjct 213 CATCTGGGACGAGTGGGCCGACGAAAACGGCGACCTGGGTCCCGTCTACGGCAAGCAATG 154 Query 1072 GCG 1074 ||| Sbjct 153 GCG 151 >seq111164 Length=7270 Score = 107 bits (118), Expect = 1e-18 Identities = 233/343 (68%), Gaps = 8/343 (2%) Strand=Plus/Plus Query 2739 CTCCCGCTGCGGTTCTGCGCGGTCCCCGAGGGCACCCTGGTACCGATCCGCG-TGCCGTC 2797 || ||| |||| || ||||||| ||||||||||| |||| ||| | || |||| | Sbjct 5848 CTGCCGGTGCGCATCCGCGCGGTGCCCGAGGGCACGGTGGTGCCGGTGGGCCATGCCCTG 5907 Query 2798 GTTCACGGTCGAGAACACCGATCCCGAGTTCTTCTGGCTGACCAACTACATCGAGACCGC 2857 || ||| | ||||||||||| || | | || |||||||| | |||| | ||||| || Sbjct 5908 GT-CACCATAGAGAACACCGACCCGGCCTGCTGGTGGCTGACGAGCTACCTGGAGACGGC 5966 Query 2858 GCTGTCGGCCGGCGTCTGGCAGGCGTCCACCTCCGCGACGATCGCCCACGAGTACCGCCT 2917 |||| | || |||||||| | || | ||| ||||||| | ||| | |||| Sbjct 5967 GCTG-CTGC--GCGTCTGGTACCCGACGACCGTCGCGACGCACAGCCATGCCACGCGCCG 6023 Query 2918 GATCCTCGACCAGGCGGCCGAGGCCACCGGTGGCGCACCCGAGGCCGTGGACTTCCAGTG 2977 ||| | | | ||||| ||| | | |||| || | | | ||| |||| || Sbjct 6024 CATCATTGCC---GCGGCGCTGGCGCGCAGCGGCGACCCTGCCGGCCTGGCCTTCAAGCT 6080 Query 2978 CCACGACTTCTCCTACCGCGGGATGTCGTCGCAGGAGTCGGCCCAGCTGTCCGGCGCGGC 3037 ||||||||| | ||||| ||||||||| |||||||||| |||| |||| ||| Sbjct 6081 GCACGACTTCGGCGCACGCGGCGTGTCGTCGCTGGAGTCGGCCATGCTGGGCGGCATGGC 6140 Query 3038 CCACCTCCTGTCGTTCAGCGGCACGGACTCCTTGGTCGCCCTG 3080 || || || ||| ||||||||| | || ||||||| Sbjct 6141 GCATCTGGTGAACTTCCAGGGCACGGACACGATGAGCGCCCTG 6183 >seq23854 Length=6065 Score = 96.9 bits (106), Expect = 2e-15 Identities = 171/247 (69%), Gaps = 2/247 (1%) Strand=Plus/Minus Query 829 GAAGGATGATCGCACCGGCACCGGCACGCTGAGCAAGTTCGGCGCCCAGCTGCGGTACGA 888 |||| | || || |||||||| |||||| |||||| ||| |||||| || Sbjct 453 GAAGCAGGACCGTACCGGCACGGGCACGAAATCGGTGTTCGGGCATCAGATGCGGTTTGA 394 Query 889 CCTCACCGAGGGCTTCCCGCTGGTCACCACGAAGCGCGTCCACTTCAAATCGGTTG-CGT 947 |||| |||| || || ||| || | || |||||| | || | || ||| | ||| Sbjct 393 CCTCGCCGACGGATTTCCGTTGCTGACGACGAAGAAGCTGCATCTGAAGTCGATCATCGT 334 Query 948 ACGAACTTCTGTGGTTCCTCAGTGGCGACACGAACGTGAAGGCGCTCAACGACAACGGCG 1007 ||| || ||||||||||| | ||||| ||||| || ||| | || ||||| Sbjct 333 -CGAGCTGCTGTGGTTCCTGCGCGGCGAGACGAATGTCGCCTGGCTGCAGGAGCGCGGCG 275 Query 1008 TCACCATCTGGGACGAGTGGGCCGACGCCGGCGGAAACCTCGGTCCTGTCTACGGCGCGC 1067 | |||||||||||||| ||||| |||||| || | ||||| || |||||||| || Sbjct 274 TGACCATCTGGGACGAATGGGCGGACGCCAATGGCGATCTCGGCCCGGTCTACGGTCAGC 215 Query 1068 AGTGGCG 1074 | ||||| Sbjct 214 AATGGCG 208 >seq71830 Length=566 Score = 89.7 bits (98), Expect = 3e-13 Identities = 189/282 (67%), Gaps = 0/282 (0%) Strand=Plus/Plus Query 794 GACCTGTTGCGCGACATCCTGGAGACTGGCAAGTCGAAGGATGATCGCACCGGCACCGGC 853 |||||| ||||| || | ||||| || ||| ||| | || || |||||||||||| Sbjct 180 GACCTGATGCGCCACGTACTGGAAACCGGCGCCCAAAAGCACGACCGTACCGGCACCGGC 239 Query 854 ACGCTGAGCAAGTTCGGCGCCCAGCTGCGGTACGACCTCACCGAGGGCTTCCCGCTGGTC 913 || | || ||| ||| ||| |||| | | | | || || ||||||||||| Sbjct 240 ACCATTAGTGTGTTTGGCTACCAAATGCGTTTTAATTTAAAAGACGGTTTCCCGCTGGTG 299 Query 914 ACCACGAAGCGCGTCCACTTCAAATCGGTTGCGTACGAACTTCTGTGGTTCCTCAGTGGC 973 || || || | ||||| |||||| | |||| | | ||||| | || || Sbjct 300 ACGACCAAAAAGCTGCACTTGAAATCGATCATCCACGAGTTGATCTGGTTTTTGAGCGGT 359 Query 974 GACACGAACGTGAAGGCGCTCAACGACAACGGCGTCACCATCTGGGACGAGTGGGCCGAC 1033 || || || | || || || || |||||||| | || ||||||||||||||||| Sbjct 360 GATACCAATATCAAATACCTAAAAGATAACGGCGTAAAAATTTGGGACGAGTGGGCCGAT 419 Query 1034 GCCGGCGGAAACCTCGGTCCTGTCTACGGCGCGCAGTGGCGG 1075 |||| || |||||||| || || || || || |||||| Sbjct 420 GCCGATGGCAACCTCGGGCCGGTGTATGGGTACCAATGGCGG 461 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 295729864582101