Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavaria_20fumosa_20[genbank_20GCA_5F001179745.1_202015-07-08] 111,201 sequences; 70,469,476 total letters Query= NC_031080.1 Length=160985 Score E Sequences producing significant alignments: (Bits) Value seq108213 96.9 4e-15 seq40814 82.4 8e-11 >seq108213 Length=2622 Score = 96.9 bits (106), Expect = 4e-15 Identities = 117/156 (75%), Gaps = 5/156 (3%) Strand=Plus/Plus Query 120457 GTGCCTGTGCGGGCCGGGCCGTGGATCCGCCGGAGGCTCGCTGGTCACCTACGTCATGGG 120516 ||||| ||| |||||||||||||| || | || || |||||||| ||||| || Sbjct 1567 GTGCCGGTG-GGGCCGGGCCGTGGTTCGGGCGCCGGTTCGCTGGTGGCCTACTCGCTGCT 1625 Query 120517 CATCACCTCGATCGATCCGATCAAGTACGACCTGATGTTCGAGCGCTTCATCAACCCGGA 120576 |||||| |||||||| || ||||| | ||| |||||||||||||| |||| || || Sbjct 1626 GATCACCGACCTCGATCCGCTCCAGTACAATCTGCTGTTCGAGCGCTTCCTCAATCCCGA 1685 Query 120577 TCGC--CCCGACTTTCCCGACATCGACGTCGACTTC 120610 ||| ||| | |||||| ||||| |||||||| Sbjct 1686 ACGCGTGTCGA--TGCCCGACTTCGACATCGACTTC 1719 >seq40814 Length=282 Score = 82.4 bits (90), Expect = 8e-11 Identities = 63/75 (84%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 95715 CGGGGTGTAGTTCAGTTTGGAAGAGCGCTTGGTTTGGGACCAAGATGTCGCAGGTTCGAA 95774 ||| | |||| |||| ||| || |||| ||||||||||||| ||||||||||||||||| Sbjct 29 CGGAGCGTAGCGCAGTCTGGTAGCGCGCCTGGTTTGGGACCAGGATGTCGCAGGTTCGAA 88 Query 95775 TCCTGTCACCCCGAC 95789 ||||| | | ||||| Sbjct 89 TCCTGCCGCTCCGAC 103 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 514308110202200