Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavaria_20fumosa_20[genbank_20GCA_5F001179745.1_202015-07-08] 111,201 sequences; 70,469,476 total letters Query= NC_031097.1 Length=52077 Score E Sequences producing significant alignments: (Bits) Value seq109454 129 2e-25 seq36499 120 1e-22 seq109371 102 3e-17 seq81106 95.1 4e-15 >seq109454 Length=55839 Score = 129 bits (142), Expect = 2e-25 Identities = 107/131 (82%), Gaps = 0/131 (0%) Strand=Plus/Plus Query 45897 TGGGTGATCGTCGGCGGCGAGTCTGGCCACGGCGCACGGCCGATGCATCCCGACTGGGCG 45956 ||||||||| ||||||||| |||||| ||| |||||||||| |||| |||||| Sbjct 47889 TGGGTGATCTGCGGCGGCGAAAGCGGCCACCACGCGCGGCCGATGCTCCCCGCCTGGGCC 47948 Query 45957 CGATCCCTGCGTGACCAGTGCGTCGCGGCTGGGGTGCCGTTCATGTTCAAGCAGTGGGGC 46016 ||| |||||| |||||||||| || || || ||||||||| |||||||||| |||||| Sbjct 47949 CGAGACCTGCGCGACCAGTGCGAGGCCGCCGGCGTGCCGTTCCTGTTCAAGCAATGGGGC 48008 Query 46017 GAGTGGGCGCC 46027 |||||| |||| Sbjct 48009 GAGTGGACGCC 48019 >seq36499 Length=515 Score = 120 bits (132), Expect = 1e-22 Identities = 107/134 (80%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 45894 GATTGGGTGATCGTCGGCGGCGAGTCTGGCCACGGCGCACGGCCGATGCATCCCGACTGG 45953 |||||||| ||||||| ||||| || ||| | ||||||||||||||||| || || ||| Sbjct 267 GATTGGGTCGTCGTCGGGGGCGAATCCGGCGATGGCGCACGGCCGATGCACCCAGAGTGG 326 Query 45954 GCGCGATCCCTGCGTGACCAGTGCGTCGCGGCTGGGGTGCCGTTCATGTTCAAGCAGTGG 46013 || ||||| || || || || |||| || || || ||||| || | |||||||| ||| Sbjct 327 GCTCGATCACTCCGCGATCAATGCGCGGCTGCCGGCGTGCCATTTCTTTTCAAGCAATGG 386 Query 46014 GGCGAGTGGGCGCC 46027 ||||||||||| || Sbjct 387 GGCGAGTGGGCTCC 400 >seq109371 Length=32687 Score = 102 bits (112), Expect = 3e-17 Identities = 98/126 (78%), Gaps = 0/126 (0%) Strand=Plus/Minus Query 45897 TGGGTGATCGTCGGCGGCGAGTCTGGCCACGGCGCACGGCCGATGCATCCCGACTGGGCG 45956 ||| | |||||||| |||||| || | ||||| || |||||||| ||| |||||| Sbjct 5631 TGGATCATCGTCGGAGGCGAGAGCGGGCCTGGCGCGCGTCCGATGCACCCCAGCTGGGCC 5572 Query 45957 CGATCCCTGCGTGACCAGTGCGTCGCGGCTGGGGTGCCGTTCATGTTCAAGCAGTGGGGC 46016 || ||||||| |||||||||| ||||| | ||| |||| ||||||||||||||| Sbjct 5571 CGCGCCCTGCGCGACCAGTGCGCGGCGGCCAGCGTGGCGTTTCACTTCAAGCAGTGGGGC 5512 Query 46017 GAGTGG 46022 |||||| Sbjct 5511 GAGTGG 5506 >seq81106 Length=13242 Score = 95.1 bits (104), Expect = 4e-15 Identities = 103/137 (75%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 45891 CTCGATTGGGTGATCGTCGGCGGCGAGTCTGGCCACGGCGCACGGCCGATGCATCCCGAC 45950 ||||| ||||| ||| ||||||||| |||| | || || |||||||| || | Sbjct 8758 CTCGACTGGGTCATCTGTGGCGGCGAGAGCGGCCCCAAGGCGCGTCCGATGCACCCGGCA 8817 Query 45951 TGGGCGCGATCCCTGCGTGACCAGTGCGTCGCGGCTGGGGTGCCGTTCATGTTCAAGCAG 46010 ||||| ||| ||| || || ||||||| || || |||||||||| ||||||||||| Sbjct 8818 TGGGCCCGAGGCCTCCGCGATCAGTGCGCGGCCGCCAAGGTGCCGTTCTTGTTCAAGCAG 8877 Query 46011 TGGGGCGAGTGGGCGCC 46027 ||||| |||| ||||| Sbjct 8878 TGGGGTGAGTTCGCGCC 8894 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 166304902024118