Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavaria_20fumosa_20[genbank_20GCA_5F001179745.1_202015-07-08] 111,201 sequences; 70,469,476 total letters Query= NC_031107.1 Length=246291 Score E Sequences producing significant alignments: (Bits) Value seq107811 188 1e-42 seq105722 174 2e-38 seq26113 158 2e-33 seq71830 154 2e-32 seq73273 123 4e-23 seq23854 120 5e-22 seq15205 107 3e-18 seq28325 100 4e-16 seq78619 89.7 8e-13 seq45343 84.2 3e-11 >seq107811 Length=6275 Score = 188 bits (208), Expect = 1e-42 Identities = 224/304 (74%), Gaps = 0/304 (0%) Strand=Plus/Minus Query 201790 CATGAAACAATATCTGGACTTACTGCGTGATGTTCGCGAAAACGGGGATGTAAAAGCCGA 201849 |||| | |||||||| ||||| |||| |||| ||| | || || ||| |||| Sbjct 4884 CATGCACCAATATCTCGACTTCATGCGCCATGTGAAAGAACATGGCAGCGTTAAAACCGA 4825 Query 201850 CCGTACCGGTACGGGCACCCTCTCTGTTTTCGGACGCCAGATGCGCTTTAACTTACAAGA 201909 ||| || || || ||||| |||| || ||||| | |||||||||||| || || || || Sbjct 4824 CCGCACGGGCACCGGCACGGTCTCCGTGTTCGGCCACCAGATGCGCTTCAATTTGCAGGA 4765 Query 201910 AGGTTTTCCGCTGGTCACCACCAAAAAGGTTCACCTTCGTTCAATCATCCATGAGCTGCT 201969 ||||||||||| || || ||||| ||| | || || || ||||||||||| ||| | Sbjct 4764 TGGTTTTCCGCTCGTGACGACCAAGAAGCTGCATCTGAAGTCGATCATCCATGAACTGAT 4705 Query 201970 GTGGTTCCTCATGGGTGACACCAACATCCAGTATTTGAAAGACAACAACGTCACCATCTG 202029 |||||||| ||| |||||||||| ||| |||| || ||| ||||| ||||| Sbjct 4704 CTGGTTCCTGGCGGGGTCCACCAACATCGGCTATCTGAAGGAAAACGGCGTCAAGATCTG 4645 Query 202030 GGACGAATGGGCGGATAAAAACGGTGACTTAGGCCCGGTGTACGGTAAGCAATGGCGTAG 202089 |||||| ||||| ||| ||||||| ||| | || ||| | ||||| | || ||||| | Sbjct 4644 GGACGAGTGGGCCGATGAAAACGGCGACCTCGGTCCGATCTACGGCTACCAGTGGCGCAA 4585 Query 202090 CTGG 202093 |||| Sbjct 4584 CTGG 4581 Score = 143 bits (158), Expect = 4e-29 Identities = 220/314 (70%), Gaps = 0/314 (0%) Strand=Plus/Minus Query 202490 CTTTCTTGTCAGCTCTATCAGCGTAGTGCGGACATGTTCCTTGGCGTACCGTTTAACATC 202549 || || || ||||| || ||||| || || ||||| ||||| ||||| ||||| || ||| Sbjct 4409 CTCTCGTGCCAGCTGTACCAGCGCAGCGCCGACATCTTCCTCGGCGTGCCGTTCAATATC 4350 Query 202550 GCGTCTTACGCCTTGCTGGTACACATGTTTGCACAACAGGCGAACATGGCGGTAGGCGAC 202609 || || ||||| ||||| |||||| | || || ||||| | | || |||||| Sbjct 4349 GCCTCGTACGCGCTGCTGACGCACATGATGGCGCAGCAGGCAGGTCTCGACGTGGGCGAC 4290 Query 202610 TTCGTCTGGACAGGTGGTGATACGCATCTGTACTCCAACCATCTGGAACAAGCTGACCTC 202669 ||||||||||| || ||||| || || || || ||||| |||| || | ||| Sbjct 4289 TTCGTCTGGACCGGCGGTGACTGCCACCTCTATTCGAACCACATGGAGCAGGTCGACGAA 4230 Query 202670 CAACTTACCCGTGACCCTAAACCGTTACCGAAGTTGGTTATCAAACGTAAGCCCGATTCC 202729 || || | || | ||| ||| | || ||| | || ||||| || ||||| || | Sbjct 4229 CAGCTCGCGCGCGCCCCGCTGCCGCTGCCCAAGCTCGTCATCAAGCGCAAGCCGGACACG 4170 Query 202730 ATCTTCGACTACAAATTCGAAGACTTCGAGGTTGTCGATTACATTTCGCATCCGGCGATT 202789 | |||||||||| ||||| ||||||||| | |||| ||| |||||| || || Sbjct 4169 CTGTTCGACTACACCTTCGACGACTTCGAGATCGTCGGCTACGCGTCGCATGCGCACATC 4110 Query 202790 AAAGCGCCCGTCGC 202803 || ||||| || || Sbjct 4109 AAGGCGCCGGTGGC 4096 >seq105722 Length=466 Score = 174 bits (192), Expect = 2e-38 Identities = 185/242 (76%), Gaps = 4/242 (2%) Strand=Plus/Minus Query 201847 CGACCGTACCGGTACGGGCACCCTCTCTGTTTTCGGACGCCAGATGCGCTTTAACTTA-- 201904 ||| || || || |||||||| ||| || ||||| |||||||| ||||| || | Sbjct 390 CGATCGCACGGGCACGGGCACACTCGGCGTGTTCGGCCGCCAGATCCGCTTCGACCTGGC 331 Query 201905 CAAGAAGGTTTTCCGCTGGTCACCACCAAAAAGGTTCACCTTCGTTCAATCATCCATGAG 201964 |||| || |||||| | | |||||||| ||| | ||||| || || ||| || ||| Sbjct 330 CAAG--GGCTTTCCGGTCCTGACCACCAAGAAGCTGCACCTGCGCTCGATCTTCATCGAG 273 Query 201965 CTGCTGTGGTTCCTCATGGGTGACACCAACATCCAGTATTTGAAAGACAACAACGTCACC 202024 |||||||||||||| | ||| ||||||||| ||| ||| || | |||||||| ||| | Sbjct 272 CTGCTGTGGTTCCTGAAGGGCGACACCAACGTCCGCTATCTGCAGGACAACAAGGTCCGC 213 Query 202025 ATCTGGGACGAATGGGCGGATAAAAACGGTGACTTAGGCCCGGTGTACGGTAAGCAATGG 202084 ||||||||||| ||||| || ||||||| ||| | || || || ||||| ||||||||| Sbjct 212 ATCTGGGACGAGTGGGCCGACGAAAACGGCGACCTGGGTCCCGTCTACGGCAAGCAATGG 153 Query 202085 CG 202086 || Sbjct 152 CG 151 >seq26113 Length=815 Score = 158 bits (174), Expect = 2e-33 Identities = 186/252 (74%), Gaps = 0/252 (0%) Strand=Plus/Minus Query 201842 AAAGCCGACCGTACCGGTACGGGCACCCTCTCTGTTTTCGGACGCCAGATGCGCTTTAAC 201901 ||| ||||||| ||||| || ||||| | | || || || | |||||||||||| || Sbjct 333 AAAACCGACCGCACCGGCACCGGCACGCGCAGCGTGTTTGGCCACCAGATGCGCTTCGAC 274 Query 201902 TTACAAGAAGGTTTTCCGCTGGTCACCACCAAAAAGGTTCACCTTCGTTCAATCATCCAT 201961 | | ||||| |||||||| ||||||||||| ||||| ||||| || || |||||||| Sbjct 273 CTGAACGAAGGCTTTCCGCTAGTCACCACCAAGAAGGTGCACCTGCGCTCCATCATCCAG 214 Query 201962 GAGCTGCTGTGGTTCCTCATGGGTGACACCAACATCCAGTATTTGAAAGACAACAACGTC 202021 || |||||||||||||| ||| || | ||| | | | |||| || | |||| Sbjct 213 GAACTGCTGTGGTTCCTGCAGGGCAGCAGCGACAACAACTGGCTGAAGGAACGCGGCGTC 154 Query 202022 ACCATCTGGGACGAATGGGCGGATAAAAACGGTGACTTAGGCCCGGTGTACGGTAAGCAA 202081 | |||||||||||||||||| |||| | |||||||||| ||||| |||| Sbjct 153 AGCATCTGGGACGAATGGGCACGGCCCGACGGCAGCCTAGGCCCGGTCTACGGCGTGCAA 94 Query 202082 TGGCGTAGCTGG 202093 ||||| |||||| Sbjct 93 TGGCGCAGCTGG 82 >seq71830 Length=566 Score = 154 bits (170), Expect = 2e-32 Identities = 214/297 (72%), Gaps = 2/297 (1%) Strand=Plus/Plus Query 201791 ATGAAACAATATCTGGACTTACTGCGTGATGTTCGCGAAAACGGGGATGTAAAAGC-CGA 201849 |||||||||||||| ||| | |||| | || | |||| ||| | |||||| ||| Sbjct 165 ATGAAACAATATCTCGACCTGATGCGCCACGTACTGGAAACCGGCG-CCCAAAAGCACGA 223 Query 201850 CCGTACCGGTACGGGCACCCTCTCTGTTTTCGGACGCCAGATGCGCTTTAACTTACAAGA 201909 ||||||||| || |||||| | ||| || || ||| ||||| ||||| ||| |||| Sbjct 224 CCGTACCGGCACCGGCACCATTAGTGTGTTTGGCTACCAAATGCGTTTTAATTTAAAAGA 283 Query 201910 AGGTTTTCCGCTGGTCACCACCAAAAAGGTTCACCTTCGTTCAATCATCCATGAGCTGCT 201969 ||||| |||||||| || ||||||||| | ||| | || |||||||| ||| || | Sbjct 284 CGGTTTCCCGCTGGTGACGACCAAAAAGCTGCACTTGAAATCGATCATCCACGAGTTGAT 343 Query 201970 GTGGTTCCTCATGGGTGACACCAACATCCAGTATTTGAAAGACAACAACGTCACCATCTG 202029 ||||| | | ||||| ||||| ||| | || | ||||| ||| ||| | || || Sbjct 344 CTGGTTTTTGAGCGGTGATACCAATATCAAATACCTAAAAGATAACGGCGTAAAAATTTG 403 Query 202030 GGACGAATGGGCGGATAAAAACGGTGACTTAGGCCCGGTGTACGGTAAGCAATGGCG 202086 |||||| ||||| ||| | || || | || |||||||| || | |||||||| Sbjct 404 GGACGAGTGGGCCGATGCCGATGGCAACCTCGGGCCGGTGTATGGGTACCAATGGCG 460 >seq73273 Length=4456 Score = 123 bits (136), Expect = 4e-23 Identities = 178/250 (71%), Gaps = 1/250 (0%) Strand=Plus/Minus Query 201838 TGTAAAAGC-CGACCGTACCGGTACGGGCACCCTCTCTGTTTTCGGACGCCAGATGCGCT 201896 || ||||| |||||||||||| || ||||||| | || ||||| | ||||||||||| Sbjct 338 TGCAAAAGAGCGACCGTACCGGCACCGGCACCCGCAGCGTGTTCGGCCACCAGATGCGCT 279 Query 201897 TTAACTTACAAGAAGGTTTTCCGCTGGTCACCACCAAAAAGGTTCACCTTCGTTCAATCA 201956 | || | | || || ||||| ||||||||||| ||||| ||||| || ||| Sbjct 278 TCGACCTGAGCCAGGGCTTCCCGCTCGTCACCACCAAGAAGGTGCACCTGAAGTCCATCG 219 Query 201957 TCCATGAGCTGCTGTGGTTCCTCATGGGTGACACCAACATCCAGTATTTGAAAGACAACA 202016 ||| ||||||||||||||||| || ||| ||||| || ||| || | || | Sbjct 218 TCCTGGAGCTGCTGTGGTTCCTGCGTGGCGACTCCAACGTCAAGTGGCTGCAGGAGCGCG 159 Query 202017 ACGTCACCATCTGGGACGAATGGGCGGATAAAAACGGTGACTTAGGCCCGGTGTACGGTA 202076 ||| || |||||| ||||||||||| |||| ||| | ||||| || || || Sbjct 158 GCGTGACGATCTGGAACGAATGGGCGCGGCCCGACGGCGACCTGGGCCCCGTCTATGGCG 99 Query 202077 AGCAATGGCG 202086 ||| ||||| Sbjct 98 TGCAGTGGCG 89 >seq23854 Length=6065 Score = 120 bits (132), Expect = 5e-22 Identities = 174/246 (71%), Gaps = 0/246 (0%) Strand=Plus/Minus Query 201848 GACCGTACCGGTACGGGCACCCTCTCTGTTTTCGGACGCCAGATGCGCTTTAACTTACAA 201907 ||||||||||| |||||||| || || ||||| | |||||||| ||| || | Sbjct 446 GACCGTACCGGCACGGGCACGAAATCGGTGTTCGGGCATCAGATGCGGTTTGACCTCGCC 387 Query 201908 GAAGGTTTTCCGCTGGTCACCACCAAAAAGGTTCACCTTCGTTCAATCATCCATGAGCTG 201967 || || |||||| || | || || || ||| | || || || |||||| |||||| Sbjct 386 GACGGATTTCCGTTGCTGACGACGAAGAAGCTGCATCTGAAGTCGATCATCGTCGAGCTG 327 Query 201968 CTGTGGTTCCTCATGGGTGACACCAACATCCAGTATTTGAAAGACAACAACGTCACCATC 202027 ||||||||||| || || || || || | || | || | ||| |||||| Sbjct 326 CTGTGGTTCCTGCGCGGCGAGACGAATGTCGCCTGGCTGCAGGAGCGCGGCGTGACCATC 267 Query 202028 TGGGACGAATGGGCGGATAAAAACGGTGACTTAGGCCCGGTGTACGGTAAGCAATGGCGT 202087 ||||||||||||||||| || || || | |||||||| |||||| ||||||||||| Sbjct 266 TGGGACGAATGGGCGGACGCCAATGGCGATCTCGGCCCGGTCTACGGTCAGCAATGGCGT 207 Query 202088 AGCTGG 202093 |||| Sbjct 206 TCCTGG 201 >seq15205 Length=1481 Score = 107 bits (118), Expect = 3e-18 Identities = 215/314 (68%), Gaps = 6/314 (2%) Strand=Plus/Minus Query 202493 TCTTGTCAGCTCTATCAGCGTAGTGCGGACATGTTCCTTGGCGTACCGTTTAACATCGCG 202552 || || |||||||| ||||| || || ||||| ||||| ||||| || || |||||||| Sbjct 1481 TCCTGCCAGCTCTACCAGCGCAGCGCCGACATCTTCCTGGGCGTGCCTTTCAACATCGCC 1422 Query 202553 TCTTACGCCTTGCTGGTACACATGTTTGCACAACAG-GCGAACATGGCGGTAGGCGACTT 202611 || || ||||| | ||| | || || ||| |||| | || | |||||||| Sbjct 1421 AGCTATGCGCTGCTGACAATGATGCTGGCCCAGCAGTGCGACC-TGCAACTCGGCGACTT 1363 Query 202612 CGTCTGGACAGGTGGTGATACGCATCTGTACTCCAACCATCTGGAACAAG--CTGACCTC 202669 | ||||||| || || || || | ||| |||||| |||| || | | |||| Sbjct 1362 CATCTGGACGGGCGGCGACTGTCACATCTACGACAACCACGTGGAGCAGGTGCAGACC-- 1305 Query 202670 CAACTTACCCGTGACCCTAAACCGTTACCGAAGTTGGTTATCAAACGTAAGCCCGATTCC 202729 || || |||| || || ||| | |||| || | |||||||| ||| | || Sbjct 1304 CAGCTCGCCCGCGAGCCACGACCCTACCCGACCATGCTGATCAAACGCCGGCCGGCGTCG 1245 Query 202730 ATCTTCGACTACAAATTCGAAGACTTCGAGGTTGTCGATTACATTTCGCATCCGGCGATT 202789 |||||||||||| | | ||| ||||||||| | || ||| |||||||||| || Sbjct 1244 ATCTTCGACTACGAGTACGAGGACTTCGAGCTGAGCGGCTACGAGCCGCATCCGGCCATC 1185 Query 202790 AAAGCGCCCGTCGC 202803 ||||| || || || Sbjct 1184 AAAGCCCCGGTGGC 1171 >seq28325 Length=165 Score = 100 bits (110), Expect = 4e-16 Identities = 114/153 (75%), Gaps = 0/153 (0%) Strand=Plus/Minus Query 201941 CACCTTCGTTCAATCATCCATGAGCTGCTGTGGTTCCTCATGGGTGACACCAACATCCAG 202000 || || || || ||||||||||| ||||| |||||||||| ||| || || || || | Sbjct 162 CATCTGCGCTCCATCATCCATGAACTGCTATGGTTCCTCAAGGGCGAGACGAATATTCGC 103 Query 202001 TATTTGAAAGACAACAACGTCACCATCTGGGACGAATGGGCGGATAAAAACGGTGACTTA 202060 || | || || || ||| | |||||||| || |||||||| ||||||| || | Sbjct 102 TACCTCAAGGAAAATGGCGTTTCGATCTGGGATGAGTGGGCGGACGAAAACGGCGAGCTT 43 Query 202061 GGCCCGGTGTACGGTAAGCAATGGCGTAGCTGG 202093 |||||||| ||||| |||||||||| |||| Sbjct 42 GGCCCGGTCTACGGCGCGCAATGGCGTTCCTGG 10 >seq78619 Length=107 Score = 89.7 bits (98), Expect = 8e-13 Identities = 79/96 (82%), Gaps = 2/96 (2%) Strand=Plus/Plus Query 202245 ACCCCGACAACCGTCGTATTATTGTCAGCGCCTGGAACGTGGCAGAGCTAGACG-AGATG 202303 ||||||||| ||| || || || |||||||||||||||||||| || || | || ||||| Sbjct 11 ACCCCGACAGCCGCCGCATCATCGTCAGCGCCTGGAACGTGGCCGACCT-GCCGCAGATG 69 Query 202304 GCCTTGGCCCCGTGTCATGCGTTCTTCCAGTTCTAC 202339 || ||| || || || |||||||||||||||||| Sbjct 70 GCGTTGATGCCCTGCCACGCGTTCTTCCAGTTCTAC 105 >seq45343 Length=151 Score = 84.2 bits (92), Expect = 3e-11 Identities = 88/116 (76%), Gaps = 0/116 (0%) Strand=Plus/Minus Query 201971 TGGTTCCTCATGGGTGACACCAACATCCAGTATTTGAAAGACAACAACGTCACCATCTGG 202030 |||||||| || |||||||| | | || || | |||||| |||||| |||||| Sbjct 151 TGGTTCCTGCGCGGCGACACCAATGTGCGCTACCTGCAGGACAACGGCGTCACGATCTGG 92 Query 202031 GACGAATGGGCGGATAAAAACGGTGACTTAGGCCCGGTGTACGGTAAGCAATGGCG 202086 ||||||||||| ||| | ||||| || | |||||||| || || | ||||||||| Sbjct 91 GACGAATGGGCCGATGAGAACGGCGATCTCGGCCCGGTCTATGGAAGGCAATGGCG 36 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 786907865701960