Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavaria_20fumosa_20[genbank_20GCA_5F001179745.1_202015-07-08] 111,201 sequences; 70,469,476 total letters Query= NC_031129.1 Length=103445 Score E Sequences producing significant alignments: (Bits) Value seq109454 145 5e-30 seq83492 132 3e-26 >seq109454 Length=55839 Score = 145 bits (160), Expect = 5e-30 Identities = 129/160 (81%), Gaps = 1/160 (1%) Strand=Plus/Plus Query 102058 CTTCC-CCTCGCCTCTGCTCGGCGCAATATTCCGGCGCACGCCTTCGAACTCAAAAAGTA 102116 ||||| ||| ||||| || ||||||| || ||||||||||||||| |||||||||||| Sbjct 36232 CTTCCGCCTGGCCTCGGCGCGGCGCAGAATCCCGGCGCACGCCTTCCCACTCAAAAAGTA 36291 Query 102117 CCGTTGCGGGATCGAGGTCTGTTCGAGCACTTGCGACAACAAACACGCGTCGGCGTCGTT 102176 || ||||||||| | |||||||||||||||||| ||||| || |||||||||| Sbjct 36292 CCTGGACGGGATCGAACCCGTCTCGAGCACTTGCGACAACGAACACACGGCGGCGTCGTT 36351 Query 102177 GTGCCACTCCGAAGTATTGGGCATCAAGGATTCTCCAGGC 102216 | |||| |||||| |||||||| || ||| | | ||| || Sbjct 36352 GGGCCAGTCCGAAATATTGGGCGTCCAGGGTCCGCCATGC 36391 >seq83492 Length=1330 Score = 132 bits (146), Expect = 3e-26 Identities = 235/338 (70%), Gaps = 6/338 (2%) Strand=Plus/Minus Query 96745 CGTGCCAATTGGGCCATTTCGTTGCTTTCCGATAATTACCTCGGCAATGCCCTTCATTTC 96804 || ||| || ||||| || || || || ||||| || | |||||| ||||||| | Sbjct 463 CGCGCCGATCGGGCCGTTACGCTGTTTGCCGATGATAATCTCGGCGGTGCCCTTG--TCG 406 Query 96805 GCT--ATCCGGGTGATAAACTTCGTCGCGATACAAAAACATGATCAGGTCTGCGTCCTGC 96862 | | ||| |||| || || |||||||| |||| || ||||| | ||| ||||||||| Sbjct 405 GGTGAATCGGGGTTGTAGACCTCGTCGCGGTACAGGAAAATGATGACGTCGGCGTCCTGC 346 Query 96863 TCAATTGCTCCTGATTCACGTAAATCTGAATTTACCGGTCGTTTGTCCGCACGCTGTTCA 96922 || ||||| || ||||| || || || || | || || || |||| || || || || Sbjct 345 TCGATTGCGCCCGATTCGCGCAAGTCGGACATCACGGGACGCTTGTTCGGCCGTTGCTCG 286 Query 96923 AGCGATCGATTAAGTTGTGACAATGCCACCACCGGTACTTGTAATTCCTTCGCCAACGCC 96982 |||| || || || || |||| || | |||||| || |||||||| |||| || Sbjct 285 AGCGCGCGGTTCAGCTGCGACAGCGCGATCACCGGGCAATGCAATTCCTTGGCCAGGCCC 226 Query 96983 TTCAGTGAGCGAGAAATCTCGGCAATTTCCAGCGTTCGGTTATCTTGCAGCTCCGGGACG 97042 || || || |||||||||| || || || |||||||| | ||| | || Sbjct 225 TTAAGGCTACGCGAAATCTCGGAGATCTCGGCGGTGCGGTTATCGCCCGGCT-GGCTACC 167 Query 97043 CG-CATAAGTTGCAGGTAGTCGATCATAATCATGCTCA 97079 || ||| || |||| |||||||| || |||| || || Sbjct 166 CGTCATCAGCTGCAAATAGTCGATGATGATCAGGCCCA 129 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 330450744826366