Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavaria_20fumosa_20[genbank_20GCA_5F001179745.1_202015-07-08] 111,201 sequences; 70,469,476 total letters Query= NC_031230.1 Length=98136 Score E Sequences producing significant alignments: (Bits) Value seq108438 84.2 1e-11 seq110673 82.4 5e-11 >seq108438 Length=3402 Score = 84.2 bits (92), Expect = 1e-11 Identities = 64/76 (84%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 46367 CCGTGGGCACGGTGATCCCCACCAAGGACGCCGTCATCCCAGCGGCCGTGGGTGTCGACA 46426 |||| ||| |||| |||||||||| | ||| ||||||| |||||||||||||| |||| Sbjct 3053 CCGTCGGCTCGGTCATCCCCACCATCAAGGCCATCATCCCGGCGGCCGTGGGTGTGGACA 3112 Query 46427 TCGGTTGCGGGATGAT 46442 |||| ||||| ||||| Sbjct 3113 TCGGCTGCGGCATGAT 3128 >seq110673 Length=5201 Score = 82.4 bits (90), Expect = 5e-11 Identities = 92/122 (75%), Gaps = 6/122 (5%) Strand=Plus/Minus Query 46324 CACGTTGCGCTGATGCCAGATGCTCACGCAGGCAAGGGGTCTGCCGTGGGCACGGTGATC 46383 ||||| ||| ||||| || | |||| |||| || | |||||||| |||||||| Sbjct 900 CACGTGGCGGCCATGCCCGACGTGCACGTGGGCATCGGTGCGACCGTGGGCTCGGTGATC 841 Query 46384 CCCAC---CAAGGACGCCGTCATCCCAGCGGCCGTGGGTGTCGACATCGGTTGCGGGATG 46440 || || ||||| || ||||||| ||||||||||| || |||||||| ||||| ||| Sbjct 840 CCGACGCTCAAGG---CCATCATCCCGGCGGCCGTGGGCGTGGACATCGGCTGCGGCATG 784 Query 46441 AT 46442 || Sbjct 783 AT 782 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 313484969104617