Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavaria_20fumosa_20[genbank_20GCA_5F001179745.1_202015-07-08] 111,201 sequences; 70,469,476 total letters Query= NC_031235.1 Length=194437 Score E Sequences producing significant alignments: (Bits) Value seq107653 217 2e-51 >seq107653 Length=176415 Score = 217 bits (240), Expect = 2e-51 Identities = 480/711 (68%), Gaps = 29/711 (4%) Strand=Plus/Minus Query 122655 TGAGATGTCATTCAGCATCGAGAAGACTTCTGTGACTGCTAAGTCCAGAGCTCTCAAAGC 122714 ||||||| | ||||||||||||||| | || || || ||| | | || || || Sbjct 133146 TGAGATGGCCTTCAGCATCGAGAAGGTCACCGTCACGGCGAAGAGCCGCGCGCTGGCCGC 133087 Query 122715 AGAATACACCTTGGAACTGGCACAAGACCTCAAGGCGATCCATGGTCTTGATGCTGAGCA 122774 || ||| | ||||||||||||| ||||| ||||| | || ||||| || || ||| Sbjct 133086 CGAGTACTCGATGGAACTGGCACAGGACCTGAAGGCAGTACACGGTCTCGACGCCGAGGC 133027 Query 122775 AGAGCTCGCTAACATTCTGTCCAGCGAAGTTCTCGCAGAGATCAACCGTGAAGTTGTTCG 122834 |||||| | ||||| || ||| ||| | || || ||||||||||| || | ||||| Sbjct 133026 TGAGCTCTCGAACATCCTCGCCACCGAGATCCTGGCCGAGATCAACCGCGAGGCGGTTCG 132967 Query 122835 TCGCGTTTACACCGTTGCAAAGAAAGGTGCTCTCAACAACGTTGCTAACCAAGGCATCTT 122894 | || ||| || ||| | || | | | | || | |||| ||| |||| Sbjct 132966 TACGGTCCTGACCTCCGCCAAGCAGGGATCGCAGATCGACACGACCAACCCGGGCTTCTT 132907 Query 122895 CGACCTCGACGTTGACTCCAACGGTCGTTGGTCAGTTGAGAAGTTCAAAGGTCTTCTCTT 122954 |||||| ||||| ||||| ||||| || ||||| |||||||||||||| ||||| || Sbjct 132906 CGACCTGGACGTCGACTCGAACGGCCGCTGGTCGGTTGAGAAGTTCAAGGGTCTGTATTT 132847 Query 122955 CCAAATCGAGCGTGATTGCAACGCAATTGCACAAGAGACTCGTAGAGGAAAGGGCAACTT 123014 ||| |||||||| || |||||| || || | ||||| | | || ||||| ||| | Sbjct 132846 CCACATCGAGCGCGAGTGCAACCAGATCGCCAAGGAGACGAGGCGTGGCAAGGGTAACAT 132787 Query 123015 CCTGATCTGCTCTGCTGACGTTGCTTCGGCGCTGGCAATGGCAGGCGTTCTCGACTACAG 123074 |||||||||| | || ||||| || ||||| ||| || | | || || |||| Sbjct 132786 CCTGATCTGCACGGCGGACGTGGCATCGGCTCTG--AACGCC--GC-----CGGCTACCT 132736 Query 123075 CAGCGGTCTGTCTGGTGCTGGCGGTCCTGCAATCGGCACTGTCGATGACACTGGCAACCT 123134 | | || | | ||| ||| ||| | || ||||| ||||| |||||| Sbjct 132735 CTCC---ATG-CCGAACCTG--GGT--GACAACCTCCA-GGTCGACGACACGGGCAACAC 132685 Query 123135 CGCAGTTGGAACCATCAACGGTCGCATCAAGGTCTATGTTGATCCTTATGCTGCTAACCT 123194 | | || | | | |||||||||||||||||||| | || || || || Sbjct 132684 CTTCGCGGGTATCCTGAACGGTCGCATCAAGGTCTACATCGACCCCTACGC--------- 132634 Query 123195 CACCGACAAGCACTACTATGT-CGTAGGTTACAAGGGCACTTCCCCATATGACGCAGGTC 123253 | || | ||||| |||| |||||| |||||||| | | || || ||||| || Sbjct 132633 GATCGGCGGAAACTAC-ATGTGCGTAGGCTACAAGGGTCCGACGCCTTACGACGCCGGCA 132575 Query 123254 TATTCTACTGCCCATATGTTCCCCTCCAGATGGTTCGCTCGATCGATCCTAACAACTTCC 123313 | ||||||||||| || ||||| |||||| |||||| | | || |||||| Sbjct 132574 TCTTCTACTGCCCGTACGTTCCTCTCCAGCAGGTTCGTGCTGTGTGGCCGGGTAACTTCG 132515 Query 123314 AACCAAAAATTGGTTTCAAGACTCGTTACGGCATGGTCAGCAACCCATTCG 123364 || || || |||||||| || |||||||||||| ||||| |||| Sbjct 132514 GTCCTCGCATCGGCTTCAAGACCCGCTACGGCATGGTCGCGAACCCCTTCG 132464 Score = 89.7 bits (98), Expect = 6e-13 Identities = 115/159 (72%), Gaps = 0/159 (0%) Strand=Plus/Minus Query 122290 TTCGACCCCGTTCTAATCAGCCTCGTTCGTCGTGCAATGCCTAACCTGATGGCATACGAC 122349 |||||||| | || |||| ||| || | || | ||||| ||||||||||| |||||| Sbjct 133490 TTCGACCCGATCCTGATCAACCTGGTCAGGCGCTCCATGCCGAACCTGATGGCCTACGAC 133431 Query 122350 GTTTGTGGCGTTCAACCCATGAGCGGTCCTACTGGACTTATCTTTGCAATGCGTTCACGC 122409 | || || || ||||||| |||||| || || || ||||| || || || || ||| Sbjct 133430 ATCATGGGTGTGCAGCCCATGACCGGTCCGACCGGCCTGATCTTCGCCATCCGCTCGCGC 133371 Query 122410 TACGACAACCAAGCAGGCGAAGAGGCACTCTTCAACGAG 122448 |||| | || | ||| | ||||| ||| ||||||| Sbjct 133370 TACGGCTCGCAGACGGGCAACGAGGCCTTCTACAACGAG 133332 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 621205714368120