Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavaria_20fumosa_20[genbank_20GCA_5F001179745.1_202015-07-08] 111,201 sequences; 70,469,476 total letters Query= NC_031249.1 Length=50127 Score E Sequences producing significant alignments: (Bits) Value seq109454 86.0 2e-12 >seq109454 Length=55839 Score = 86.0 bits (94), Expect = 2e-12 Identities = 121/168 (72%), Gaps = 8/168 (5%) Strand=Plus/Minus Query 43021 CGAAGAACCTCATGGGAATGCCGTGGCGCGTCGCGTTCGCGCTCCAAGACGACGGCTGGA 43080 |||| || | ||||| ||| |||||||| || |||||||| || ||||| || ||| Sbjct 34708 CGAAAGACATGATGGGCCAGCCCTGGCGCGTGGCCTTCGCGCTGCAGGACGATGGTTGGT 34649 Query 43081 TACTCCGCAACGACGTCATCTGGCACAAGCCAAACGCTATGCCGGAGAGCATCACCGACC 43140 ||||| | || |||||||||||||||| ||| | ||||| |||||| ||||| Sbjct 34648 GGCTCCGTCAGGAAATCATCTGGCACAAGCCCAACCCGATGCCAGAGAGCGCGCGCGACC 34589 Query 43141 G----ACTCAGTGTTCGCTACGAGCACGTATTCATGCTGTCCAAGTCG 43184 | || || ||| ||||||| |||| ||||||| |||||| Sbjct 34588 GCTGCACCAAG---GCGC-ACGAGCAGATATTTCTGCTGTCGAAGTCG 34545 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 160073142018218