Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavaria_20fumosa_20[genbank_20GCA_5F001179745.1_202015-07-08] 111,201 sequences; 70,469,476 total letters Query= NC_031253.1 Length=77832 Score E Sequences producing significant alignments: (Bits) Value seq36499 116 2e-21 seq109371 86.0 3e-12 >seq36499 Length=515 Score = 116 bits (128), Expect = 2e-21 Identities = 108/137 (79%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 52599 CCGGGATTGATTGGGTCGTGGTGGGTGGCGAATCCGGTACGGGCGCAAGGCCGATGCATC 52658 || |||||||||||||||| || || ||||||||||| |||||| |||||||||| | Sbjct 259 CCAGGATTGATTGGGTCGTCGTCGGGGGCGAATCCGGCGATGGCGCACGGCCGATGCACC 318 Query 52659 CCGAGTGGGCGCGGTCGCTTCGTGACCAGTGCGCCGCGGCCAAGGTGCCGTTCCTGTTCA 52718 | |||||||| || || || || || || ||||| || ||| ||||| || || |||| Sbjct 319 CAGAGTGGGCTCGATCACTCCGCGATCAATGCGCGGCTGCCGGCGTGCCATTTCTTTTCA 378 Query 52719 AGCAGTGGGGCAACTGG 52735 |||| |||||| | ||| Sbjct 379 AGCAATGGGGCGAGTGG 395 >seq109371 Length=32687 Score = 86.0 bits (94), Expect = 3e-12 Identities = 101/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 52600 CGGGATTGATTGGGTCGTGGTGGGTGGCGAATCCGGTACGGGCGCAAGGCCGATGCATCC 52659 ||| ||| | ||| || | || || ||||| ||| | ||||| | |||||||| || Sbjct 5641 CGGCATTCACTGGATCATCGTCGGAGGCGAGAGCGGGCCTGGCGCGCGTCCGATGCACCC 5582 Query 52660 CGAGTGGGCGCGGTCGCTTCGTGACCAGTGCGCCGCGGCCAAGGTGCCGTTCCTGTTCAA 52719 | ||||| || | || || ||||||||||| ||||||| ||| |||| | ||||| Sbjct 5581 CAGCTGGGCCCGCGCCCTGCGCGACCAGTGCGCGGCGGCCAGCGTGGCGTTTCACTTCAA 5522 Query 52720 GCAGTGGGGCAACTGGA 52736 |||||||||| | |||| Sbjct 5521 GCAGTGGGGCGAGTGGA 5505 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 248600224283673