Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavaria_20fumosa_20[genbank_20GCA_5F001179745.1_202015-07-08] 111,201 sequences; 70,469,476 total letters Query= NC_031266.1 Length=44872 Score E Sequences producing significant alignments: (Bits) Value seq109371 208 2e-49 seq69633 93.3 1e-14 >seq109371 Length=32687 Score = 208 bits (230), Expect = 2e-49 Identities = 355/514 (69%), Gaps = 3/514 (1%) Strand=Plus/Plus Query 39287 CAACAACGACTGCGTTCACGAAACCGAGAGAATGGCAGACGATTCGGTGGATCTGATTGT 39346 |||| |||||||||| || || ||| | | ||||| ||| || | ||| | | Sbjct 22916 CAACGACGACTGCGTGCAGGAGACCCGGCGCATGGCGTCCGACAGCGTCGGCCTGGTCCT 22975 Query 39347 CACCAGCATTCCGTTCTCCAACCACTACGAGTACACGCCGAGCTACAACGATTTCGGCCA 39406 |||||||| || ||| || || ||||||||| |||||| || | ||| ||||| || Sbjct 22976 GACCAGCATCCCCTTCAGCACGCAGTACGAGTACTCGCCGAACTTCGCCGACTTCGGGCA 23035 Query 39407 CACCGACGACAACGCGCATTTCTGGGCGCAGATGGACTACCTCACACCGCAGCTGCTGCG 39466 |||||| ||||| ||| |||| ||||||||||||||| ||| |||||||||| Sbjct 23036 CACCGATAGCAACGAGCACTTCTTCCAGCAGATGGACTACCTGGTGCCGGAGCTGCTGCG 23095 Query 39467 CATCCTCGCGCCGGGCCGTATCTACGCCTGCCACGTCAAGGACCGCATCTTGTT---CGG 39523 | | || ||| ||| | | || |||||||||| |||||||| || ||| Sbjct 23096 CGTGCTGATGCCAGGCAGGGTGGCGGCGATCCACGTCAAGAACCGCATCGTGCCGAGCGG 23155 Query 39524 CAACGTCACCGGCGCCGGCGTGCCCACCGTGTCCCCGTTTCACGCCGAGGCGATCTTCCA 39583 || ||| |||| ||| | | |||| || |||||| || || || | | Sbjct 23156 CATGGTCGAGGGCGTTGGCTTCCAGACCGAGTACCCGTTCGACATGGACACGCTGGCCTG 23215 Query 39584 CGGCCGCAAACACGGCTTCGACTACCTCGGCATGATCACCGTCGTAACCGATGTGGTGCG 39643 | ||| ||||||||| ||||| ||||| | || || | || || ||||| || Sbjct 23216 CTTTCGCCGGCACGGCTTCCACTACATCGGCCGCAAGCCCATCATCACGGACGTGGTCCG 23275 Query 39644 GGAAAACAACCAGACGTACCGGCTGGGCTGGTCCGAGCAGTGCAAAGACGCCACCAAGAT 39703 ||| ||||||||||| ||| ||||||||||| |||||| ||||| |||| | | || Sbjct 23276 GGAGAACAACCAGACCTACAGGCTGGGCTGGAGCGAGCAATGCAAGGACGGTAGCCGCAT 23335 Query 39704 GGGCGTCGGCTCCCCGGAATACATTCTGCTGTTCCACAAACCGCAAACAGACAGGTCCCG 39763 |||| ||||| || ||| | ||||| |||| ||| ||| || ||| ||| Sbjct 23336 GGGCTTCGGCCTGTGCGAGTACCTGCTGCTCTTCCGCAAGGCGCCGACCGACGCTAGCCG 23395 Query 39764 TGGGTATGCCGACGTACCGGTCATCAAGAGCAAG 39797 ||| ||||||||| |||||||| ||||| |||| Sbjct 23396 TGGCTATGCCGACCTACCGGTCTTCAAGGACAAG 23429 Score = 105 bits (116), Expect = 2e-18 Identities = 255/374 (68%), Gaps = 18/374 (5%) Strand=Plus/Plus Query 37917 CCGGGCGAGATTCACTCGATGTTGTTGCCGCACCAG--CGCGATCTGGTGCGTTGGGCGG 37974 |||| |||||| || || ||||| | ||||||| |||| | || ||||| Sbjct 21510 CCGGCCGAGATCAACCCGCTGTTGAAGTTGCACCAGATCGCGGCC--GTCATCTGGGCAA 21567 Query 37975 TC-GCCGGGGGTAGGCGCGCGATCTTCGCGGCGTTCGGCCTGGGCAAGACGGTGATGCAG 38033 || ||| || | ||| ||| | ||| ||| |||||||||||||||||| | |||| Sbjct 21568 TCCGCCTCGGCTGTGCG-GCGCTGTTCATGGCCTTCGGCCTGGGCAAGACGTTCGTGCAA 21626 Query 38034 CTGGAGATCGTGCGCCT-GTC-GCTAGCCAAGCATGGCGGTGGGCGAGGCTTGATCGTGA 38091 |||||||||||||| | ||| || || |||| |||||| ||| ||||||| | Sbjct 21627 CTGGAGATCGTGCGGATCGTCCGCGCGC---GCAT--CGGTGGCATGGGCCTGATCGTCA 21681 Query 38092 TGCCGCTGGGCGTGCGGATCGAGTTCGCCCACGACGCCAACATGCTGGGCATCGAAACCC 38151 | || ||| || || ||||||| | |||||| | |||||||||| | | Sbjct 21682 TCCCACTGTCGGTCCGCCAGGAGTTCGTGCGCGACGCGGCGAAGCTGGGCATCAAGGTCA 21741 Query 38152 GGTTTGTTCGCCGCACAGAAGAAGTCGGCGGCGACG---GTATCTACCTCACCAACTACG 38208 ||| | ||| || || || | | || | || | ||||||||||||||||||| Sbjct 21742 AGTTCATCCGCACCATCGACGAGGCTGACGACCCCGCGGGCATCTACCTCACCAACTACG 21801 Query 38209 AGAGCGTTCGCGATGGAAAGCTCGACCCGACACTGTTCACGGCCGTCTCACTCGACGAGG 38268 || || || || || ||||| ||||||| ||||||| | | | || ||||||| Sbjct 21802 AGTCGGTGCGGGACGGCAAGCTGGACCCGATGCTGTTCAGCGTGGCCAGCCTGGACGAGG 21861 Query 38269 CGAGCGTG-CTGCG 38281 || || || ||||| Sbjct 21862 CG-GCTTGCCTGCG 21874 >seq69633 Length=120 Score = 93.3 bits (102), Expect = 1e-14 Identities = 86/109 (79%), Gaps = 0/109 (0%) Strand=Plus/Minus Query 39410 CGACGACAACGCGCATTTCTGGGCGCAGATGGACTACCTCACACCGCAGCTGCTGCGCAT 39469 ||| || |||| ||||||||||| ||||||||| | ||| | ||||||||||||||||| Sbjct 120 CGATGATAACGAGCATTTCTGGGAGCAGATGGATTTCCTGATCCCGCAGCTGCTGCGCAT 61 Query 39470 CCTCGCGCCGGGCCGTATCTACGCCTGCCACGTCAAGGACCGCATCTTG 39518 || ||||| || || ||| ||| ||| || ||||| |||||| || Sbjct 60 TCTGGCGCCCGGGCGGATCGCGGCCATCCATGTGAAGGATCGCATCGTG 12 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 143279347745908