Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavaria_20fumosa_20[genbank_20GCA_5F001179745.1_202015-07-08] 111,201 sequences; 70,469,476 total letters Query= NC_031281.1 Length=43516 Score E Sequences producing significant alignments: (Bits) Value seq109454 122 2e-23 seq109371 120 8e-23 seq81106 116 1e-21 seq36499 114 4e-21 >seq109454 Length=55839 Score = 122 bits (134), Expect = 2e-23 Identities = 106/132 (80%), Gaps = 0/132 (0%) Strand=Plus/Plus Query 37850 CTGCATTGGGTGATCGTCGGCGGCGAGAGCGGGCCCGGCGCTCGGCCGATGCACCCGGCC 37909 ||||| ||||||||| ||||||||| ||||| | | ||| |||||||||| ||| ||| Sbjct 47883 CTGCACTGGGTGATCTGCGGCGGCGAAAGCGGCCACCACGCGCGGCCGATGCTCCCCGCC 47942 Query 37910 TGGGCGCGCTCACTCCGCGACCAATGCACGGCGGCCGATGTGCCGTTCCTGTTCAAGCAG 37969 ||||| || || |||||||| ||| ||| |||| |||||||||||||||||||| Sbjct 47943 TGGGCCCGAGACCTGCGCGACCAGTGCGAGGCCGCCGGCGTGCCGTTCCTGTTCAAGCAA 48002 Query 37970 TGGGGTGAATGG 37981 ||||| || ||| Sbjct 48003 TGGGGCGAGTGG 48014 >seq109371 Length=32687 Score = 120 bits (132), Expect = 8e-23 Identities = 104/129 (81%), Gaps = 0/129 (0%) Strand=Plus/Minus Query 37853 CATTGGGTGATCGTCGGCGGCGAGAGCGGGCCCGGCGCTCGGCCGATGCACCCGGCCTGG 37912 || ||| | |||||||| |||||||||||||| ||||| || ||||||||||| |||| Sbjct 5634 CACTGGATCATCGTCGGAGGCGAGAGCGGGCCTGGCGCGCGTCCGATGCACCCCAGCTGG 5575 Query 37913 GCGCGCTCACTCCGCGACCAATGCACGGCGGCCGATGTGCCGTTCCTGTTCAAGCAGTGG 37972 || ||| | || |||||||| ||| |||||||| ||| |||| | |||||||||||| Sbjct 5574 GCCCGCGCCCTGCGCGACCAGTGCGCGGCGGCCAGCGTGGCGTTTCACTTCAAGCAGTGG 5515 Query 37973 GGTGAATGG 37981 || || ||| Sbjct 5514 GGCGAGTGG 5506 >seq81106 Length=13242 Score = 116 bits (128), Expect = 1e-21 Identities = 99/122 (81%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 37856 TGGGTGATCGTCGGCGGCGAGAGCGGGCCCGGCGCTCGGCCGATGCACCCGGCCTGGGCG 37915 ||||| ||| |||||||||||||| ||| || || |||||||||||||| ||||| Sbjct 8764 TGGGTCATCTGTGGCGGCGAGAGCGGCCCCAAGGCGCGTCCGATGCACCCGGCATGGGCC 8823 Query 37916 CGCTCACTCCGCGACCAATGCACGGCGGCCGATGTGCCGTTCCTGTTCAAGCAGTGGGGT 37975 || |||||||| || ||| |||| ||| | ||||||||| ||||||||||||||||| Sbjct 8824 CGAGGCCTCCGCGATCAGTGCGCGGCCGCCAAGGTGCCGTTCTTGTTCAAGCAGTGGGGT 8883 Query 37976 GA 37977 || Sbjct 8884 GA 8885 >seq36499 Length=515 Score = 114 bits (126), Expect = 4e-21 Identities = 110/140 (79%), Gaps = 1/140 (1%) Strand=Plus/Plus Query 37843 CCCTGGACTGCATTGGGTGATCGTCGGCGGCGAGAGCGGGCCCGGCGCTCGGCCGATGCA 37902 ||| ||| || ||||||| ||||||| ||||| ||| ||||| ||||||||||| Sbjct 258 CCCAGGATTG-ATTGGGTCGTCGTCGGGGGCGAATCCGGCGATGGCGCACGGCCGATGCA 316 Query 37903 CCCGGCCTGGGCGCGCTCACTCCGCGACCAATGCACGGCGGCCGATGTGCCGTTCCTGTT 37962 ||| | ||||| || ||||||||||| |||||| |||| |||| ||||| || || || Sbjct 317 CCCAGAGTGGGCTCGATCACTCCGCGATCAATGCGCGGCTGCCGGCGTGCCATTTCTTTT 376 Query 37963 CAAGCAGTGGGGTGAATGGG 37982 |||||| ||||| || |||| Sbjct 377 CAAGCAATGGGGCGAGTGGG 396 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 138945877711036